| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5994 |
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| Symbol | |
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| ID | 6280505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2221842 |
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| End bp | 2223482 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642617055 |
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| Product | Uracil-DNA glycosylase superfamily |
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| Protein accession | YP_001889698 |
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| Protein GI | 187920666 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.263417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TTGCTATCGA ACCGTCTTTT GCCGCCTGGC GCCATGCGGC GCGGGAACTT
CTGCGGCAAG GCGTCGAGCC GGAGCGGATC GAGTGGGTTG AATGCGATCC GTGCGATTCG
GCCGGCTCGG ATAGCGGCAA CGCAAGCGCT CAACAAGGTT CCGCCACCGC TCAGGCAACT
CCCACGCCCG CGATTCCTCG TGAGCTGCTC GCCTGGCTGA AAACGGCGGC CTGCTATTAC
GCGCCGGACC GTTGGCCGCT GCTCTATCGC ATCCTGTGGC GTTGGACACA CGGCGAACGC
CACGTCCTCG ATCTGCAAGA CGTGGACGGC GCGTTGCTCG ATCAGCGCAT TCAGTCGGTC
GAGCATGAAA TCAGTGATCT GGTGGCGCTC ACCCTGTTCA GGCGACGCGA TCCGTCCATG
GGAGCGCCGG AATTCGTCGG CTGGTACGAG CCGCATCATG ATCTGCTGGC GCAGGCCGCC
GAGCGTTTTG CCGAGCGCAT GGGCGATTCC ACGTGGATGC TGGCGACGCC GCAAGGCGCG
GCGTTCTGGA ACGGCATGCT GCTGCAAATC AGCCGGCCGG CGACGGAAGA AAACGGGCAC
GTCACGCACG TTTTGCCGGC CGGTCAGTTG AACGGGCCAG CCACGCCAGC ATTGCCGCCG
GGCCAGCGGA AAGGCCCGAC TACTCCGACA TTGCCGAAGA GCCAGCCGAA CGGGCCGACT
GCTCCGACAT TGCCGCCGAG CCAGCGGAAC GGCCCAACCA CGCCGACATT ACCGCCGAGC
CAGCGGAGCG AGCCGACCAC TCCGACATTG CCCCGCGCCG CCATGGCTGG CGAAGCCACG
ACCAGTGAAC CCACCGAGGC CCTCTGGCTC GCCTACTACG CCAGCGTATT CAATGGCGCG
CCGACGCCCA TGCCGCTGCG TTACTGGAAA ACACCCCCCG CTGGTCCGCC GCTCCCCGCG
CGACTCGCGC GCGAACGGAG CCGTCTCGGC GCGCAGAGTG GCACTGTCAC CATTCCTGAG
ACACCGCCGC TCGAATATTC GGCGGTGACG CCACCCTTGC GCGAGCCCAC CGGCCCGCTG
CCCACCTGCC GACGCTGCGC GTTGTGGCGC AACGCGAAGC AGGCCGTCGC GGGCGCCGGT
CCGGCTCGGG CCGCGCTCAT GGTGGTCGGC GAACAACCCG GCGAGCATGA GAACCAGCAC
GGTGTGCCCT TCACGGGCCC CGCCGGTCAA CTGCTCGACA CGGTGCTCGT GCGCGCCGGC
CTCGAACGCT CGGCGCTCTA TCTGACCTAT GCCGTCAAGC ATTACAAGTG GGAAACGCTG
GAACAGCGGC GCGTCCATCG CACACCCGCG CGGCGCGAGG TCGAGGCTTG CCAGTACTGG
CTGGACCACG AGCTCGCGCA GGTCGCGCCG CGCGTGGTCG TCACGCTCGG CGCAACGGCG
CTGAAGGCGT TGACGGGCGC GCACGTCAAT CTGTCGGAGT ATCTGGGGCA GACCATCGAT
CACGGCGGCC GGCTGATCGT GCCGACGTGG CATCCATCGT ATGCGCTGAA AATGGCCGAT
GGACGGTTGC GCGAGGATAT CGTCGCGGGC ATGGTGGCAG CGTTCAGGCA CGCGGCAGGG
TTGGCGGCGG AAGGGGCGTA G
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| Protein sequence | MKRIAIEPSF AAWRHAAREL LRQGVEPERI EWVECDPCDS AGSDSGNASA QQGSATAQAT
PTPAIPRELL AWLKTAACYY APDRWPLLYR ILWRWTHGER HVLDLQDVDG ALLDQRIQSV
EHEISDLVAL TLFRRRDPSM GAPEFVGWYE PHHDLLAQAA ERFAERMGDS TWMLATPQGA
AFWNGMLLQI SRPATEENGH VTHVLPAGQL NGPATPALPP GQRKGPTTPT LPKSQPNGPT
APTLPPSQRN GPTTPTLPPS QRSEPTTPTL PRAAMAGEAT TSEPTEALWL AYYASVFNGA
PTPMPLRYWK TPPAGPPLPA RLARERSRLG AQSGTVTIPE TPPLEYSAVT PPLREPTGPL
PTCRRCALWR NAKQAVAGAG PARAALMVVG EQPGEHENQH GVPFTGPAGQ LLDTVLVRAG
LERSALYLTY AVKHYKWETL EQRRVHRTPA RREVEACQYW LDHELAQVAP RVVVTLGATA
LKALTGAHVN LSEYLGQTID HGGRLIVPTW HPSYALKMAD GRLREDIVAG MVAAFRHAAG
LAAEGA
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