Gene Bphyt_5989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5989 
Symbol 
ID6280450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2216171 
End bp2216896 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID642617050 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_001889693 
Protein GI187920661 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.566254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGC ATAACGAAAG TCAGGATCCG GGCGACGTCC CAGCCGCCAT CCCAACCAAA 
CCTTCACGCC GCCGCTTTCT TCAATCTGCT GCCGCTGCCG CCACGGTCGG GGCGGCACCG
CATCTGCGCG CGCAAACCCA AACCCCAACC GCGCCGCCGG CTCAGGTTCA GCAAGCCGTG
CCGCCGCGTC CGGTCACGCT GACCGTGAAT GGCCGCGCAT ACACGCTGCA ACTCGAACCG
CGCGTGACCT TGCTCGATGC ATTAAGGGAA TACGCGGGCC TGATGGGCAC GAAGAAAGGC
TGCGATCGCG GTCAATGCGG CGCATGCACG GTGCTCGCCG ACGGCCGCCG CATCAACTCA
TGCCTGACGC TCGCCGTGAT GCATGAAGGC GAGAACATCA CGACGGTCGA AGGGCTTGCC
GCCAACGGCG TATTGAGTCC GATACAGCGC GCCTTCATCG AACACGATGC CTTTCAATGC
GGTTACTGTA CGCCCGGGCA GTTGTGCTCC GCGACTGCCC TTCTGAACGA ATTCCGCAAC
GGCACCGCCA GCACCGTCAC GGCCGATGTC CGCATTCGCC CCGCCCAACT TTCCGACGAA
GAAATCCGCG AGCGCATGAG CGGCAACATT TGCCGCTGCG GCGCCTACGC GAATATCGTG
GCCGCTGTAC GCGCGGTGCA CGAAGGCGGC GGACCAGTCA GCGGCAACGA CAACCCCAAC
GCCTGA
 
Protein sequence
MSSHNESQDP GDVPAAIPTK PSRRRFLQSA AAAATVGAAP HLRAQTQTPT APPAQVQQAV 
PPRPVTLTVN GRAYTLQLEP RVTLLDALRE YAGLMGTKKG CDRGQCGACT VLADGRRINS
CLTLAVMHEG ENITTVEGLA ANGVLSPIQR AFIEHDAFQC GYCTPGQLCS ATALLNEFRN
GTASTVTADV RIRPAQLSDE EIRERMSGNI CRCGAYANIV AAVRAVHEGG GPVSGNDNPN
A