| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5959 |
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| Symbol | |
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| ID | 6279431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2182363 |
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| End bp | 2183514 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617021 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001889664 |
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| Protein GI | 187920632 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.42426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC GAAAACCGAT GACAAAACGG ATGGTGATCA TGCTGATCTG CGTGGGCCTG
CTGCTGGCCG CGCTCGTCGG CTTCAACGTG TTCCGCGCGC ACATGATCGC GAAATTCATG
TCGGGTAACG CAGCGCCGCC CGCCACGGTC TCGGCGGTCG TCGCCCGTTA TCAGCAATGG
CAACCGCAGC TTGCGGCGGT CGGCAGCCTG CGCGCCGTGC GCGGCGTGGA TGTCACCACC
GAAGTCGCGG GCCTCGTACG CGAAGTCGCC TTCAGCTCGG GACAGGAAGC GAGAGCCGGG
CAGGTTCTCA TCCGACTCAA CGCCGATAGC GACGTGGCGC TGCTCCGGTC GCTAGAGGCA
TCCGCCGAGC TCGCGCAGAC CGTCTACACG CGCGACAAAG CGCAGTACGA CATCAAGGCG
ATCGCCAAGG CGCAGCTCGA CGCCGACGCC GCCGACCTGA AGGTCAAGAA GGCGCAAGTC
GCGCAACAGG CCGCGCTCGT CGACAAGAAG ACGATTCGCG CGCCGTTCGC CGGGCGCCTG
GGCATTACCA CGATCAATCC CGGGCAATAC ATCAATCCGG GCGACGCGAT CGTCACGCTC
CAGGCCATCG ATCCGATCTA CGCCGATTTC TACCTGCCGC AGCAGCAACT CGGCCAGCTC
GCGATCGGCC AGACCATCGT GGTCGATACC AACGCATACA GCGGCCAAAC GTTCGTGGGC
AAGATCCAGT CGGTCAGCCC GAAGGTCGAC AGCACCACGC GCAACGTGCA GATCGAAGCG
AGCGTGGACA ACCGGGAGCG CAAGCTGCTG CCGGGCATGT ACGCGAACGT GAAGATCGAC
GCGGGCGCGG GCCAGCGCTA CCTGACGCTG CCGCAAACCG CCATCACGTA CAACCCCTAT
GGCGCGACCG TATTCATCGT CAAGCCGGGC ACGCAACCCA ATGCGCAGGG TAAGGCGCTG
CCCGTCGCGC AGCAGGTGTT CGTCACACCC GGCCCGACGC GCGGCGATCA GGTCGCGATC
CTCAAAGGGG TCGACGACGG CGCGCAAGTC GTGACGAGCG GGCAACTCAA GCTGAAAAAC
GGCACGCCGC TCGTCATCAA TAACAGCGTG CAGCCGGCGG ACGATCCGAA CCCGACGCCT
CAGGAACAAT AG
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| Protein sequence | MTERKPMTKR MVIMLICVGL LLAALVGFNV FRAHMIAKFM SGNAAPPATV SAVVARYQQW
QPQLAAVGSL RAVRGVDVTT EVAGLVREVA FSSGQEARAG QVLIRLNADS DVALLRSLEA
SAELAQTVYT RDKAQYDIKA IAKAQLDADA ADLKVKKAQV AQQAALVDKK TIRAPFAGRL
GITTINPGQY INPGDAIVTL QAIDPIYADF YLPQQQLGQL AIGQTIVVDT NAYSGQTFVG
KIQSVSPKVD STTRNVQIEA SVDNRERKLL PGMYANVKID AGAGQRYLTL PQTAITYNPY
GATVFIVKPG TQPNAQGKAL PVAQQVFVTP GPTRGDQVAI LKGVDDGAQV VTSGQLKLKN
GTPLVINNSV QPADDPNPTP QEQ
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