| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5873 |
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| Symbol | |
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| ID | 6277570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2086917 |
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| End bp | 2087603 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616936 |
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| Product | two component heavy metal response transcriptional regulator, winged helix family |
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| Protein accession | YP_001889579 |
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| Protein GI | 187920547 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.247228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTGC TGATTGTTGA AGACGAGCAC AAGGTGGTGG ACTACCTGCG CTCCGGTTTG
ACAGAGCAGG GGTGGGTCGT CGACGTCGCG CTCGACGGCG AGGAGGGCAT GCATCTGGCC
ACCGAATTCG ATTACGACGT GATCGTCCTC GACGTGATGC TACCCAAGCG CGACGGCTTC
AGCGTGCTCA AGGCGCTGCG CATGCGTAAG TCCACGCCGG TCATCATGCT CACCGCGCGC
GACCACGTGA ACGATCGCGT CCGCGGCCTG CGCGAAGGCG CGGACGACTA CCTAACCAAA
CCCTTTTCGT TTCTCGAACT GGTCGAGCGC TTGCATGCGT TGGCGCGCCG CACGCGCTCG
CAGGAGTCGA CGCTGATTTC CGTCGGCGAT CTGTTCGTCG ATCTGATCGG GCGGCGCGCG
ACCCGCGACG GCGTGCGCCT CGATCTCACC GCCAAAGAAT TCCAGCTGCT CAGCGTGTTG
GCGCGCCGGC AAGGCGACAT TCTGTCGAAG ACCGCGATCA CCGAACTCGT CTGGGACGTC
AACTTCGACA GCCATACCAA CGTGGTCGAG ACCGCGATCA AACGACTGCG CGCCAAGCTC
GACGGCCCGT TCCCCTCGAA ACTGCTGCAT ACCGTGCGCG GCATGGGGTA TGTGCTCGAA
GTGCGCGAAG AGGCGGAGCA GTCATGA
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| Protein sequence | MKLLIVEDEH KVVDYLRSGL TEQGWVVDVA LDGEEGMHLA TEFDYDVIVL DVMLPKRDGF
SVLKALRMRK STPVIMLTAR DHVNDRVRGL REGADDYLTK PFSFLELVER LHALARRTRS
QESTLISVGD LFVDLIGRRA TRDGVRLDLT AKEFQLLSVL ARRQGDILSK TAITELVWDV
NFDSHTNVVE TAIKRLRAKL DGPFPSKLLH TVRGMGYVLE VREEAEQS
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