Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5813 |
Symbol | |
ID | 6278964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2015628 |
End bp | 2016968 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642616877 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001889520 |
Protein GI | 187920488 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.243583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.354769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGGCA CTTTCCGTTC GCTGCGCAAT TTCAATTACC GGGTCTGGGC GGGCGGCGCG ATCGTCTCCA ACATCGGCAC GTGGATGCAG CGCACGGCGC AGGACTGGCT CGTCCTCACG GAACTCACGC GTCACAATGC GACCGCCGTG GGGATCGTCA TGTCGCTGCA GTTCGGCCCG CAATTGCTGC TGTTGCCGCT CACCGGTTAT GCGGCCGATC ACTTCGACCG CCGCAAGCTG CTGTTCGCCA CCCAGGCGGC CATGGGCACC TGCGCACTGG GCCTCGGCAT TCTCACCGTG ACCGGGCTCG TGCAGTTGTG GCACGTCTAT GTGTTCGCGG GGCTGCTCGG CTGCGTCACC GCGTTCGACT CGCCGGTGCG CCAGACCTTC GTGTCCGATC TGGTCGGCGA AGAAGATCTG TCGAACGCCG TCGGCCTGAA TTCCACTTCG TTCAACATGG CGCGCATGGT CGGGCCCGCG GTCGCCGGTT TGCTGATCGC ATCGGTCGGC ACCGGTTGGG TGTTTCTGAT CAATGCGCTG TCTTTCGTCG CCGTGCTCGG GTCGCTGCGC ATGCTGCGGC TGAACGAACT GCATCTGAGG CCGGCTGCGG CGCGCTCGCG CGGCAGTTTC GTGGAAGGCT TCAAATATGT CTGGAAGCGC CCCGATCTGG TGACCGCGTT GTTGATGCTG TTCCTGATCG GCACGTTCGG CCTGAACTTC CCGATCTTCA TTTCGACGAT GTCGGTCACG GAGTTTCATG CGGGCGCCAG CGAATACGGC GTGCTGAGTT CGACCATGGC GATCGGCTCC GTGACCGGCG CGCTGCTCGC CGCGCGCCGT GCGAAACCGC GCATGGTGCT GCTGCTCGGC GCAGCGGCCA TGTTCGGGGT GGGCTGTACG CTGGCTTCGC TGATGCCGAG CACCCTGTTG TTCGGCCTGA TGCTCATCGC GATCGGCGTC TCGACGCAGA CCTTCTCGAC CTCCACCAAC AGTCTCGTGC AAGTCACTAC CGAGCCTGCC ATGCGCGGCC GGGTGATCGC GATTCTGCTG GCTATTTTGA TGGGCGGCAC GCCGCTCGGC GCGCCGGTCG TCGGCTGGGT CGCGGACCGT TTCGGCCCAC GCTGGGCGCT CGGGGTCGGC GCGGCTTCGG GATTCGCGGC GGCGCTCGTC GGCTTGCTTT ATTTCGTGAA GTACCGCCAA TTGCGCGTGT ATATCGAAGC GGGGCGTCTG CGCTACAGCG TCGACGATCC GCGGCAGGCG CCTGCTTATG TCAGCCCAGC CGCCGCAGTG CAAAACGCCG TGTTGAGCGA AGCGGAAGAA GATTCGTCTG CGGGCGTTTA A
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Protein sequence | MTGTFRSLRN FNYRVWAGGA IVSNIGTWMQ RTAQDWLVLT ELTRHNATAV GIVMSLQFGP QLLLLPLTGY AADHFDRRKL LFATQAAMGT CALGLGILTV TGLVQLWHVY VFAGLLGCVT AFDSPVRQTF VSDLVGEEDL SNAVGLNSTS FNMARMVGPA VAGLLIASVG TGWVFLINAL SFVAVLGSLR MLRLNELHLR PAAARSRGSF VEGFKYVWKR PDLVTALLML FLIGTFGLNF PIFISTMSVT EFHAGASEYG VLSSTMAIGS VTGALLAARR AKPRMVLLLG AAAMFGVGCT LASLMPSTLL FGLMLIAIGV STQTFSTSTN SLVQVTTEPA MRGRVIAILL AILMGGTPLG APVVGWVADR FGPRWALGVG AASGFAAALV GLLYFVKYRQ LRVYIEAGRL RYSVDDPRQA PAYVSPAAAV QNAVLSEAEE DSSAGV
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