Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5785 |
Symbol | |
ID | 6277394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1988209 |
End bp | 1989660 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642616851 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_001889494 |
Protein GI | 187920462 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGCT ATATGCAACT GGCGGCGGAG TTCGAAAGCC TTATTTTGAA CGGTACGCTT GAACCCGGCG CGCGGCTCCC GTCGGTGCGT CAGGCGAGCA GTTCGTACCG CGTGAGCTCT TCAACCGTTT TCCATGCTTA CTACACCCTC GAACGACGTG CCCTGATCGT CGCAAGACCT CGCTCCGGTT ATTTCGTCGC AAGTCGGCCA GCGCCAACGA AATCGCTGGC GATTGTTTCA AAGCGCAGTA TTGACGAGGC TGACGGCGAC AGCCTGACGA TCCGCTTCAT GAAGGCTCAA CGTCGATGTG CGTATCCGGG GCTTGGCTCG TCGGAGCCAA GTGCTCTGCT GTTCCCGTTT GGCCGGATTT CGCGCTCTTT GACTGCGGCC ACCCGGAGGA TGGCGAGTTC CCGGAACACG TTGTCGGCGG GAAAGGCGGA GACAGAGCTG CGTCGCCAGA TCGCCCTGCG CTACATTGTC ACGGGAGTGA CGGTCCCTAT CGACGAGGTT GTCGTGACGT GTGGGGCGCT CGATGCACTG ACTCTCTGCC TGCAGGTTCT GACGCGGCCT GGCGACACCA TCGCAATAGA ACGGCCCGCT TTCCATGCTG TGCAAGATGC GGTTAAGCGA CTGCATCTGA AGGTCGTGGA AATTCCTGTC GATCCACACC ATGGGCTCGA TCTCGGTGTA TTGGCGGAGG CGTTGCGGCA GCATCCGGTA CGGGCTTGCT GGTTTATGAC GACGCTGCAC CAGCCGACAG GCGCGACGCT CTCTGATGAA CGGAAGGAGG CGCTCGTCAG GTTGCTGGCA AAACATGGCG TGCCGCTAAT CGAGGACGAC GTATTTCGCG AACTGCATTT TGGTTTAACG CCGGCCTATC CGGCAAAGCG CTTCGATTCC AACGGTCTCG TGCTGCACTG CGGTTCGTTT TCGAAGAGCC TTACGCCGGG TCTGCGCCTC GGTTGGGTAG CGGCCGGGCG GTACGCCGCG AGAATTGAGC AGGCACGTTG GCTGACGATG GGTCCGGCGT CTGTGCCGGT GCAATGTGCC ATTGCTGACT ACCTCGAGCA TGGGGACTAC GACCAACTTC TACGTAAACT GCGCCGCGAA CTCGCGTCCC TTCAGACCCG GATGGTGGCT GCGATCGTCA GGTACTTTCC CAAAGGAACA CTGGTGGTCC GTCCGCCGGG CGGATTCTTT CTATGGGTGC AGCTTCCAGA GGGAGTAGAG GCAGTGCGAT TGTTCGAAAT GGCGGAAGCG CACGAGATCG CGATAGCACC CGGTGCAATC TTTTCATGCG GTCGTGAATT TCGCCGTCAT ATCCGGCTTA ACTATGGCCG CCCGTGGACC GCGGACGTGG AAAAGGAGAT GCGCACGTTG GGCACGCTGG CGAGGCGAGC AATGGCGGAG CATCGTACTG CCCGGCATAC GGTGCGCAAG GCAGCGGAAT AA
|
Protein sequence | MKRYMQLAAE FESLILNGTL EPGARLPSVR QASSSYRVSS STVFHAYYTL ERRALIVARP RSGYFVASRP APTKSLAIVS KRSIDEADGD SLTIRFMKAQ RRCAYPGLGS SEPSALLFPF GRISRSLTAA TRRMASSRNT LSAGKAETEL RRQIALRYIV TGVTVPIDEV VVTCGALDAL TLCLQVLTRP GDTIAIERPA FHAVQDAVKR LHLKVVEIPV DPHHGLDLGV LAEALRQHPV RACWFMTTLH QPTGATLSDE RKEALVRLLA KHGVPLIEDD VFRELHFGLT PAYPAKRFDS NGLVLHCGSF SKSLTPGLRL GWVAAGRYAA RIEQARWLTM GPASVPVQCA IADYLEHGDY DQLLRKLRRE LASLQTRMVA AIVRYFPKGT LVVRPPGGFF LWVQLPEGVE AVRLFEMAEA HEIAIAPGAI FSCGREFRRH IRLNYGRPWT ADVEKEMRTL GTLARRAMAE HRTARHTVRK AAE
|
| |