| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5743 |
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| Symbol | |
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| ID | 6279229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1946080 |
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| End bp | 1947465 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616813 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001889456 |
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| Protein GI | 187920424 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0804971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAT CGCCTGTTTC ATCCGGCAAC GCGCCGGTTA TCAGCCGGTC GGCCGTCAAC
CGTGTGCTGG CCGCTTCGGT GGTCGGGACC GCCATCGAGT GGTACGACTT TTTTCTCTAC
GCCACCGCTT CGGCGCTGGT CTTCGCCAAG CTGTTCTTCC CCTCGTTCGA TCCGGTGGTC
GGCACCATCG CGGCGTTCGG CAGCTTTGCG GTCGGCTATG TCGCACGGCC TTTCGGCGCC
GTGTTTTTCG GGCACTTTGG CGATCGTATC GGACGTAAGG CGACGCTCGT CGCGACGCTG
ACGATCATGG GCGTCAGCAC CTTCGTGATC GGCCTGCTGC CGACTTATGC CTCGATCGGC
GTCTGGGCGC CGATCCTGCT GGTGGCGATG CGCTTCATGC AAGGGCTCGG CGTCGGTGGC
GAATGGGGCG GCGCGGTGCT GATGGTGGTC GAAACGGCGC CGGCCAGGAA GCGAGGCTTT
TTCGGCGCGT TCCCGCAACT GGGCGTGCCG CTCGGGCTGA TGCTCTCGAC GGCGGTGTTC
AAAGCCGTGT CGAGTATGCC GTCGGACGCG TTCTATTCCT GGGGATGGCG CCTGCCGTTC
CTGTTGAGCG TCGCGCTGAT CGCGATCGGC CTGTTCATCC GCCTGCGTGT CATGGAGTCG
CCGGTATTCG AACAGATCAA GGCAAGCAAG CAGGTCGTGA AGGCGCCGCT GGTTGAATTG
CTGCGCCGGC ATCCGAAAGA CCTCGTGCTG ACGATCGGCA CGCGCTTCGC GGTCGACATT
ACCTTCAACG TGATCAACGT GTTCGTGCTG GTCTACGGAA CGACGCGGCT CGGCTTGTCG
CGTGGGCTGC TGCTGAACGC GATCATCGTG GGCTGCGCGT TTGCGCTGAT CACGCTGCCG
CTGTTCGGCA AACTGTCGGA CGTGATCGGA CGCCGGACCG TGTTCATGCT CGGCGCGGTG
TTCGTCGCGA TCTATGGATT CGCGTTCTTT CCGTTGCTCG AGACACGCAA TCCGACCTTG
ATTTTCGTGG CGTACGTCTG CGGTATCGCG TTGAGCCAGG CGTCGGTGTA CGGCGTGCAA
TCGACGTGGT TCGCGGAACT GTTCGGTACG CGGGTGCGCT ATACGGGGGC GTCGCTGCCG
TATCAGATCG CCGGCATCAT CACGTCGGGG CCGACGCCAT TGATCGCCAC CTATCTGTTC
GCGACCTACG GCCAGACGCT GCCCATTTCG ATCTATATCG CGGCGACGGG GTTGCTGAGC
CTGGTGTGCG CGTTTTTCCT CGCCGAGACG TTCAGGCGGG ACCTGTCCGC GGAGCCGGAA
GATGAGGCGG CCGCAGCGCC GGGCGCGCGT GCGTCCGCGC ATTCGCCGCA TCCTCTGACG
CGCTGA
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| Protein sequence | MNTSPVSSGN APVISRSAVN RVLAASVVGT AIEWYDFFLY ATASALVFAK LFFPSFDPVV
GTIAAFGSFA VGYVARPFGA VFFGHFGDRI GRKATLVATL TIMGVSTFVI GLLPTYASIG
VWAPILLVAM RFMQGLGVGG EWGGAVLMVV ETAPARKRGF FGAFPQLGVP LGLMLSTAVF
KAVSSMPSDA FYSWGWRLPF LLSVALIAIG LFIRLRVMES PVFEQIKASK QVVKAPLVEL
LRRHPKDLVL TIGTRFAVDI TFNVINVFVL VYGTTRLGLS RGLLLNAIIV GCAFALITLP
LFGKLSDVIG RRTVFMLGAV FVAIYGFAFF PLLETRNPTL IFVAYVCGIA LSQASVYGVQ
STWFAELFGT RVRYTGASLP YQIAGIITSG PTPLIATYLF ATYGQTLPIS IYIAATGLLS
LVCAFFLAET FRRDLSAEPE DEAAAAPGAR ASAHSPHPLT R
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