Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5704 |
Symbol | |
ID | 6277517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1906546 |
End bp | 1907223 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642616777 |
Product | ChaC family protein |
Protein accession | YP_001889420 |
Protein GI | 187920389 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3703] Uncharacterized protein involved in cation transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.891612 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACA GAAACGCCAT AAGCTCGGGC GCCTACCTCG AAAGTTTTGA ATCGCTGCCC AAAGACATGC TGTGGACGCA GGCGCAGATC GACGCGTCGC TCGCACACAC CATGCAGCAG CGTCCGGACA ATGGCGAGGT CTGGGTCTTC GCCTACGGCT CGCTGATGTG GAATCCGATC TCGGACTTCG ACAGCCGCCG CATCGCGACC CTGCACGGCT GGCATCGCAG CTTCTGCATC CGCATGATCG CCGGACGCGG CACGCCGCAG CAGCCGGGCC GCATGCTCTC GCTCGAGCAA GGCGGCTGCA CGCAAGGCGT CGCGTTGCGC CTGTGCGGCG AGACGCTCGA AGAGGAACTG CGCATTCTCT GGATTCGCGA GATGGTGACG GGTGCGTATC GTCCGACGTG GGCGCCGGTC ACGCTGGAGG ACGGCACCGA ATTATCCGCG ATCGCCTTCG TGGCGGATCA CGGGAATCCG CAATACGAAG GCGACGCGCG AGCGCCGCTG ATCGCACCAT TGATGGCCGT GGCGAGCGGT CTGTTCGGTA CGAACGCGGA GTACGTGTTC AAGCTGCAAC GCGCGCTCGC GGACTGCGGC CTGAAAGATG CCTATATCGA CGAACTCGTC GCCGAACTCA CCGCCGAACT TGCACGGATC GCCGGACAAC CGGCGTGA
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Protein sequence | MLNRNAISSG AYLESFESLP KDMLWTQAQI DASLAHTMQQ RPDNGEVWVF AYGSLMWNPI SDFDSRRIAT LHGWHRSFCI RMIAGRGTPQ QPGRMLSLEQ GGCTQGVALR LCGETLEEEL RILWIREMVT GAYRPTWAPV TLEDGTELSA IAFVADHGNP QYEGDARAPL IAPLMAVASG LFGTNAEYVF KLQRALADCG LKDAYIDELV AELTAELARI AGQPA
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