Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5698 |
Symbol | |
ID | 6279920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1901509 |
End bp | 1902756 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642616771 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001889414 |
Protein GI | 187920383 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.574634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATTG AAGACAATCT GCCCGCGAGC ACGGCCTCGC TGGACGATGG CGCCTCGTCG TCCCTGCGTT CATGGCTGGC TGTCATGGCT GTCGCCATCG GCGCTTTCGC TTTCGTGACG ACGGAGTTCC TGCCGGTCGG ACTGCTGCCG CGCGTCGCCG CGGATCTGGG CGTGTTGCCC GGCACCGCCG GCCTGATGGT CACCGTGCCC GGCGTCATCG CGGCCATTTC CGCACCGGGG CTGATGCTGG TGGCGGGGCG CATGGATCGC CGGCGAGTGT TTCTCTTGCT CACGGCTTTG CTGCTGGCGT CGAATCTGAT CTCTGCTTTC GCGCCGAATT TTCTCTGCAT GTTGCTCGGG CGTGCATTGC TCGGCGCCGC GCTGGGTGGA TTCTGGACGC TGGCCACGGC GGCTTCGGGG CGTCTCGTGA AACCGAAGGA TTCGGCGCGG GCCATGGCGA CGATTCTCAC CGGCGTGACG TGCGCCACGG TGATCGGCGT GCCGCTCGGC ACGTTCATCG CGAGCTTCGC ATCATGGCGC GTGTCGTTCA TGGCGACCGG CGTGCTGGTC GCGGTCGCGC TGGTCGCACA GTTCTTCTTC GTGCCGTCCT TGCCGTCCAC CGCCGCGCTG CGTCTGCGCG ATCTGGTGGC GCTGCTGCGC CGGCCGCATC CACGCCGCAG CATGCTGATG GTGGCGCTCG TTTTCGGCGC GCATTTTTCC TCGTACACGT ACATCACGCC TTTCCTGCTG CACAACGCGA ATCTCGACAT GTCGACCATC ACGTGGCTGT TGCTGGGGTT CGGCATCATC GGCTTCTTCT CGAACTTCGC CGTTTCGTCG ACGGTCACGC GCAATCTGAA AGTGTCGGTC GGCGCAATGG TGTCGCTGTT GATGTTCGCA CTGGTCTTGC TGCCGCTACT GCAGCATTCG ACAATCGGCG TCGTGGCGCT GGTGCTTGCA TGGGGCATTT CCTTCGGCGC GTTGCCGCTG TGTTTCAGCA TCTGGATTCA GCGCGCCACG CCGGATTCGC CCGAGGCCGG CTCGGCATTG TTCGTGAGCA TCATTCAGGT GGCGATTGCG CTGGGGTCGC TGGTGGGCGG CGTGGTGGTC GACCATGTGG GAATTTCCGC CGACTTTCTG CTGGGTAGCG GCCTCGCGTT GCTGGGGCTC GCCGCGCTCG CGAGCTTCGG CCGCGGCGAG CAGAAGGTCG CCGCCGAAGC GGTGGCTTGC CCCGCGTGCA CGGAGTAA
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Protein sequence | MLIEDNLPAS TASLDDGASS SLRSWLAVMA VAIGAFAFVT TEFLPVGLLP RVAADLGVLP GTAGLMVTVP GVIAAISAPG LMLVAGRMDR RRVFLLLTAL LLASNLISAF APNFLCMLLG RALLGAALGG FWTLATAASG RLVKPKDSAR AMATILTGVT CATVIGVPLG TFIASFASWR VSFMATGVLV AVALVAQFFF VPSLPSTAAL RLRDLVALLR RPHPRRSMLM VALVFGAHFS SYTYITPFLL HNANLDMSTI TWLLLGFGII GFFSNFAVSS TVTRNLKVSV GAMVSLLMFA LVLLPLLQHS TIGVVALVLA WGISFGALPL CFSIWIQRAT PDSPEAGSAL FVSIIQVAIA LGSLVGGVVV DHVGISADFL LGSGLALLGL AALASFGRGE QKVAAEAVAC PACTE
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