Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5689 |
Symbol | |
ID | 6280055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1892939 |
End bp | 1894117 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642616762 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001889405 |
Protein GI | 187920374 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.905556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGC CTACCATCCG GCACGTGCGT GCCTTCATCG TCCGCGGAGG CGGTGCGGAT TATCACGACC AACCCGGCGG ACACTGGATC GACGATCACA TCTCAACACC GATGGCGCGT TATCCGGAGT ATCGCCAGAG CCGCCAGTCG TTCGGTATCA ATGTGCTGGG TACGCTGGTG GTGGAGATCG AAGCGAGCGA CGGCACCGTC GGTTTTGCGG TAACGACGGG CGGCGAGATC GGCGCGTTCA TCGTCGAGAA ACATCTCGCG CGGTTTCTCG AAGGCCAACT CGTGACCGAC ATCGAGAAGA TGTGGGATCA GATGTATTTC TCGACTTTGT ACTACGGTCG CAAAGGCGTG GTGCTGAATA CGATCTCGGG CGTCGATCTC GCGTTGTGGG ATCTGCTCGC GAAAGTGCGC AAGGAGCCGG TGTACCAGCT ATTGGGAGGT CCGGTGCGCG ACGAACTCGT GTTCTATGCG ACCGGTGCGC GGCCCGATCT GGCGAAGGAG ATGGGTTTCA TCGGCGGCAA GCTGCCGTTG CAGCATGGTC CGGCCGAAGG CGAAGCAGGC CTCAAGCAGA ATCTGGAGAA ACTCGCGGAC ATGCGCAGCC GCGTCGGCGA CGACTTCTGG CTGATGTACG ACTGCTGGAT GAGCCTCGAC GTGCCGTACG CAACGCGGCT TGCGCAAGCC GCGCACGAAT ACGGCCTGAA ATGGATCGAA GAATGCCTGC CGCCCGACGA CTACTGGGGT TACGCCGAAC TGCGCCGCAA CGTGCCACGC GGCATGATGG TGTCGACCGG TGAACACGAA GCGACGCGCT GGGGCTTTCG CATGCTGCTC GAAATGCAAT GCTGCGATCT GATTCAACCG GATGTCGGCT GGTGCGGCGG CATTACCGAA TTGATCAAGA TCTCCGCGCT CGCCGATGCG CACAATGTGA TGGTGGTGCC GCACGGTTCA TCGGTGTATA GCTATCACTT CGTGGTCACC CGGCACAACT CGCCGTTCGC CGAGTTTCTG ATGATGGCGC CCAAGGCCGA CGAAGTCGTG CCGATGTTCA CACCGCTGCT GCTCGACGAA CCAGTACCGG TGAATGGACG CATGAAGGTG CCGGACACGC CGGGTTTCGG CGTGAGGCTG AATCCGGAAT GCGCGTTGGT GCGGCCTTAT CCACGGTGA
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Protein sequence | MAMPTIRHVR AFIVRGGGAD YHDQPGGHWI DDHISTPMAR YPEYRQSRQS FGINVLGTLV VEIEASDGTV GFAVTTGGEI GAFIVEKHLA RFLEGQLVTD IEKMWDQMYF STLYYGRKGV VLNTISGVDL ALWDLLAKVR KEPVYQLLGG PVRDELVFYA TGARPDLAKE MGFIGGKLPL QHGPAEGEAG LKQNLEKLAD MRSRVGDDFW LMYDCWMSLD VPYATRLAQA AHEYGLKWIE ECLPPDDYWG YAELRRNVPR GMMVSTGEHE ATRWGFRMLL EMQCCDLIQP DVGWCGGITE LIKISALADA HNVMVVPHGS SVYSYHFVVT RHNSPFAEFL MMAPKADEVV PMFTPLLLDE PVPVNGRMKV PDTPGFGVRL NPECALVRPY PR
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