| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5679 |
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| Symbol | |
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| ID | 6280446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1883195 |
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| End bp | 1884280 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616752 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001889395 |
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| Protein GI | 187920364 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.841044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA ACATGAAGAA GGCGACTTTG AGCTTCACCT GCGCCGGACT TTCCGGACTT
GCAGCCGGCG TGCAGGCGCA ATCGAGCGTG ACCATGTACG GCATTATGGA TGCGGGGGTC
GAGTACGTGA ACCATGCGAG CGGCGCGGGC GGCGAAGGCA GCGCTGTCCG TCTGGTGTCC
GGCGGCAGGA ACACCTCGCG CTGGGGTTTG CGGGGCGTCG AAGATCTCGG TGGCGGCATG
AAGGCGGTGT TTCAACTGGA AAGCGGCATC AACATCGCCA ACGGACAGTT CGACGACGGA
CCCGACTCGA TCTTCGCCCG CCGCGCCTTT ATCGGTCTGA AAAGCCGCTA CGGGCAACTC
ACGCTCGGCC GCAATTTCAC GACCACCTTC GACTACATGC TGCCGTTCGA TCCGATGGGT
TATGCGCCGA ACTACTCGTG GGGCGTCTCC TCGACAGCAG CAGCCGGCCG GCGCGATCTG
ATCTTCGTGC GTTCGGCCAA CGCCGTGCGT TACGACGGCA CGTACTCCGG CTTGAAGTTC
GGCGCGCTGT ACGGCTTCGG CAATGTGCCC GGAAACATGA AGACAAGCTC GAAGTACAAC
GTCGGTCTCG GCTACGAGCG GGGTCCGTTC GCCGCGGTCG CGACATTCGA CCGGCAAAAT
GGCGCGAGCG ACAGCGTCAT ACCCGCCGAC ATCACCGATT ACATCCAGGG CATTCATGCG
GGGGTGAGCT ATGACTTCGG CGCTGTGAAG GCGATGGCGG GCTATCGCAC CTATCAGCGC
ACGTTCCGCA CCCAACAGCA AACGCAGCGC AGCAGCACGT ACTGGATCGG TGCTCAATAC
GAGGTGACAC CCGTCGTGAC GCTGTCCGGC GCGGTCTACT ATCAGGACGT CAAGAATAGC
GACGGCGGCG ATCCGACGCT GTTCTCGGTG CGCGGGCAGT ATGCCCTGTC GAAACACACC
GTGCTGTATC TGTCGGGCGC CTATGCGATG ACCGGGCACG GAAAGCTGGT CAGCGTGTCG
CGTGACCTGG CAGGCGCGTC GGATACGCAG GTGGGTGTCA CCGTGGGTGT TCAGCAGCGG
TTCTGA
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| Protein sequence | MKSNMKKATL SFTCAGLSGL AAGVQAQSSV TMYGIMDAGV EYVNHASGAG GEGSAVRLVS
GGRNTSRWGL RGVEDLGGGM KAVFQLESGI NIANGQFDDG PDSIFARRAF IGLKSRYGQL
TLGRNFTTTF DYMLPFDPMG YAPNYSWGVS STAAAGRRDL IFVRSANAVR YDGTYSGLKF
GALYGFGNVP GNMKTSSKYN VGLGYERGPF AAVATFDRQN GASDSVIPAD ITDYIQGIHA
GVSYDFGAVK AMAGYRTYQR TFRTQQQTQR SSTYWIGAQY EVTPVVTLSG AVYYQDVKNS
DGGDPTLFSV RGQYALSKHT VLYLSGAYAM TGHGKLVSVS RDLAGASDTQ VGVTVGVQQR
F
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