| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5659 |
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| Symbol | |
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| ID | 6279832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1863862 |
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| End bp | 1865853 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616733 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001889376 |
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| Protein GI | 187920345 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCCAAC GTTCCGTCAC GCCGCCCGCT GTCGGTCGGC CCGATGTCAT CGCGCAAGCT
CACGCCCGCT CGCTCGAAAT CGGCTTGCGC GCCTCGGAAG CGCCGGACTT TCATCCGCTG
CCCCGGCCTG CGCTGCGTGA ACTCGTCGAG CGCAATCAAT CGCTGTTTAC GCATGCGCTG
CCGGTCATGG AGACGCTGCA TGCGCAGATC GTCGATACGC AAAGCATGGT GCTGCTCACC
GACAATCACG GCGTGATCCT GCATAGTCTC GGCGACAGCG ACTTCGTCGA AAAGGCCAAT
CGCGTTGCAC TGTGTCCGGG CGTGTCGTGG GCCGAGGCGG ATCGCGGCAC CAATGCGATC
GGCACCGCGC TCGTCGATGG CCAGCCGACC GTCGTGCACG CGGGAGAGCA CTTCCTGCAC
GCCAACCGGA TTCTCACCTG TTCATGCGCG CCGATTGCCG ATCCGTTCGG GCGCACCATC
GGCGCGCTCG ACGTAAGCGG CGACACCCGC GGCTTTCACA AGCACACGCT CGCGCTCGTG
AGAATGTCGG CGCAGATGAT CGAAAATCAT CTGTTCTCCA ATCAATTCGC CGATGCGATC
CGCGTGCACT TTCACGCGCG CGGGGAATTC ATCGGCACGC TGTTCGAAGG GCTCGCGGCG
TTCGCGCCGG ACGGCACGTT TCTGTCGGCC AATCGCAGTG CGCTGTTTCA ATTCGGGCAA
GCGCTCGCCG AACTGCAACG GCAGCCGTTC GATGCGTTGT TCGGCGTGCC CATCTCGAGG
CTGTTGCAAC AGATTGCGCG CGCACCCGGC GAGAACATTC AGTTGACGCT GCCAAGCGGC
GTGCGCGTGG TCGCGCGCGG CGAATATGCG CTGCCGCGTT ATGTCGCGCC GTCGGAGAGT
CTCGCCGGCA CTTCCCGTGC GCCGTTGTCC AGCGACGCGC GTCATGCGCC GCGCGTCGCC
GATCCCGCGC CGCCAGCCAC GCTCGAAACG CTCGATACCG GCGACGCGCA AGTCGCCGCG
ATTCTGCGGC GCGTCGCCAA ACTGCGCGGC CGCGATATTC CGATTCTGGT GCTCGGCAAG
ACGGGCACCG GCAAGGAATG GCTCGCGCGC GCCATCCATC ACGATTCGCC GCGCCGGGAC
GCGCCCTTTA TCGCACTGAA TTGCGCGTCG TTGCCCGAGA CGCTGATCGA AGCGGAGTTG
TTCGGCTATG AAGACGGCGC GTTCACCGGC GCGAAGAAAC GCGGCAGCGT CGGCAAGATC
GTGCAGGCCG ACGGCGGCAC GCTGTTCCTC GACGAAATCG GCGACATGCC GCTCGCCCAG
CAAGTGCGCC TCATGCGCGT GCTGCAGGAG CGCAACGTGG TCCCGCTCGG CGGGACACGG
GCGATTCCGG TGGATCTGCG CATCGTCTGT GCAACGCACC GCAACCTGCG CGCAATGATC
GAGGCCGGCA CGTTCCGCGA AGATCTGTAT TACCGCATCA ATGGACTCGT CCTGACCTTG
CCGGCGCTGC GCGAGCGCAC CGATCTTCGC GCGCTCGTCA CGCGCATGCT GGAGTTGCAG
CCCGCCGGCG AACGCTTGCC GCGTCGCGTG TCCGCCGACG TGCTCGAACG CTTCGCGCAA
TGCCGCTGGC CGGGCAATCT GCGGCAACTG GCCAACGTGT TGCGCACCGC GAGCATCATG
GCCGAAGGCG CGGAGCAGAT CGAACTCGAT GATCTGCCCG AGGACTTCTT GCAGGATTGC
ATCGACACCG CGGCCGAGCC GTGCGTGCAG TCGCCGGCAA TGCGTGCGGA CTCCGGATCC
TGCGACGAGG TCCGCGCCGC GGCGCAAACG CAAGGGCAGC CGGCAACCAG CAAGATGGAG
GCATGGCAGG CCACGCTGAT CGCGCAAACG CTCGAACGGC TCGACGGCAA TGTCTCGGCG
GCGGCGCGTG AGTTGGGCCT GGCGCGCAAT ACCGTGTACC GGTATTTGCG GCGCGGCGGC
TCGACTCATT GA
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| Protein sequence | MTQRSVTPPA VGRPDVIAQA HARSLEIGLR ASEAPDFHPL PRPALRELVE RNQSLFTHAL
PVMETLHAQI VDTQSMVLLT DNHGVILHSL GDSDFVEKAN RVALCPGVSW AEADRGTNAI
GTALVDGQPT VVHAGEHFLH ANRILTCSCA PIADPFGRTI GALDVSGDTR GFHKHTLALV
RMSAQMIENH LFSNQFADAI RVHFHARGEF IGTLFEGLAA FAPDGTFLSA NRSALFQFGQ
ALAELQRQPF DALFGVPISR LLQQIARAPG ENIQLTLPSG VRVVARGEYA LPRYVAPSES
LAGTSRAPLS SDARHAPRVA DPAPPATLET LDTGDAQVAA ILRRVAKLRG RDIPILVLGK
TGTGKEWLAR AIHHDSPRRD APFIALNCAS LPETLIEAEL FGYEDGAFTG AKKRGSVGKI
VQADGGTLFL DEIGDMPLAQ QVRLMRVLQE RNVVPLGGTR AIPVDLRIVC ATHRNLRAMI
EAGTFREDLY YRINGLVLTL PALRERTDLR ALVTRMLELQ PAGERLPRRV SADVLERFAQ
CRWPGNLRQL ANVLRTASIM AEGAEQIELD DLPEDFLQDC IDTAAEPCVQ SPAMRADSGS
CDEVRAAAQT QGQPATSKME AWQATLIAQT LERLDGNVSA AARELGLARN TVYRYLRRGG
STH
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