| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5652 |
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| Symbol | |
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| ID | 6278950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1857348 |
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| End bp | 1858916 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642616726 |
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| Product | protein of unknown function DUF107 |
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| Protein accession | YP_001889369 |
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| Protein GI | 187920338 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.995494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCTA TCCGCGGCGA CATGGCGGGC CGGTTGATGC GCGGCATGAC CGTGCTCGGC
ATGCTTTTGG CGTTTGGATT CGCGTCGTGC GAATCGAATG TGGCGCTGCG CGCCGCGGTC
GCCCCGAACA GCGTCGTCGT CATTCCAGTG AACGGAGCGA TCAGTCCGGC GAGCGCCGAC
TTCATCGTGC GCAGCCTGCA GCGTGCCGCT GAAGATCGCG CGCAACTCGC CGTGCTGCAA
CTGGATACGC CAGGCGGGCT CGACACGTCG ATGCGGCAGA TCATCAAGGC GATTCTCGGC
TCGCCGGTGC CGGTCGCCAC CTTCATCGCC CCGAGCGGCG CACGCGCGGC GAGCGCCGGC
ACGTATATCG TCTACGCGAG CCACATTGCG GCGATGGCGC CGGGCACCAA TCTCGGCGCG
GCGACACCCA TCCAGATGGG CATCGGCGGC GCTGAACCGC CGGGGGGTGG TGGGACGCCG
GGGTTGCCGG GCGTTGGTGG CGGTGGTACG GGCGGCGGTG GTCACGCTGG CGGTGCGGGT
AACGACGCTG GCGATACCGG CGCCGGCAAC CCGAGCAAAC CCGCTGCATC CGCGCCCACC
GGCCCCGCCA GCGCCCTGCC GCTGGACACC CAATCGACCG AGATGCGCAA GCAGGTCCAC
GACGCCGCCG CCTACATCCG CGGCCTTGCG CAGATGCGCG GACGTAACGC CGACTGGGCC
GAGCGCGCGG TACGCGAAGC CGTGAGCCTG TCGGCGGCGG ATGCGCTCGC GCAGCACGTC
GTCGACCTGA ACGCGCGCGA TGTGCCCGAC CTGCTGCGCC AGGTCGACGG CCGCACGCTC
GTCACGAGTG CGGGCAACGT CAAGCTCGAC ACAGCCAACG CCCGGATCGT CACGCTGGAA
GCCGACTGGC GCAGCCACTT CCTCGCCGTG ATCACCGATC CCAACGTTGC GCTGATCCTT
CTGATGATCG GCATGTATGG CCTGTTCTTC GAATTCGCCA ATCCGGGCTT CGTGCTGCCC
GGCGTGGTCG GCGCGATCAG CCTGCTGCTC GGCCTGTTCG CCATGCAGAT GATGCCCATC
AACTACGTCG GCCTCGGCCT GATTTTTCTC GGTATCGCTT TCCTGATCGG CGAGGCGTTT
CTGCCGACCT TCGGCTCGCT CGGCTTCGGC GGCGTGGTCG CGTTCGTGAT CGGCGCGCTG
ATGCTGATCG ATACCGACGT GCCCGGCTAC GGCATCCCTC TGCCGATGAT CGCCGCCGTG
ACCGTGTTCA GCGTGGTGTT CGTGCTGGGC GTGTCGCGGC TCGCGCTGAG CGCGCGGCGC
CGTCCGGTGG TGACGGGTTC GGAAGCAATG ATCGGCAGTG TCGGCGTGGT GCTCGACGGC
GGTCTGTCGC CGGCGGACCT CACCGCGGAC GGCGCGCTGG CCGGTTGGGC ACAAGTGCAT
GGGGAACGCT GGCGGGTGTC CAGCACGGCC CCGGTCGCGG CGGGCCATGC GGTGCGCGTC
ACCGCGCGGC GCGGCCTGAC GTTGACCGTG GTGCCCACGG AAGCACGACA ACAAGGAGAA
GGCTCATGA
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| Protein sequence | MSPIRGDMAG RLMRGMTVLG MLLAFGFASC ESNVALRAAV APNSVVVIPV NGAISPASAD
FIVRSLQRAA EDRAQLAVLQ LDTPGGLDTS MRQIIKAILG SPVPVATFIA PSGARAASAG
TYIVYASHIA AMAPGTNLGA ATPIQMGIGG AEPPGGGGTP GLPGVGGGGT GGGGHAGGAG
NDAGDTGAGN PSKPAASAPT GPASALPLDT QSTEMRKQVH DAAAYIRGLA QMRGRNADWA
ERAVREAVSL SAADALAQHV VDLNARDVPD LLRQVDGRTL VTSAGNVKLD TANARIVTLE
ADWRSHFLAV ITDPNVALIL LMIGMYGLFF EFANPGFVLP GVVGAISLLL GLFAMQMMPI
NYVGLGLIFL GIAFLIGEAF LPTFGSLGFG GVVAFVIGAL MLIDTDVPGY GIPLPMIAAV
TVFSVVFVLG VSRLALSARR RPVVTGSEAM IGSVGVVLDG GLSPADLTAD GALAGWAQVH
GERWRVSSTA PVAAGHAVRV TARRGLTLTV VPTEARQQGE GS
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