Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5627 |
Symbol | |
ID | 6280120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1830835 |
End bp | 1831788 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616701 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001889344 |
Protein GI | 187920313 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCA GACAATTACG CTATTTTCTT AGCGTCGTGA AGCATGGAAG CATGGGCAAG GCAGCGCTGG AACTCGGCGT GGTCACATCG GCACTGAGTC AGCAGATCAG CCGGCTCGAA GGCGAACTGT CCACGCGTCT GCTGCAACGC ACGTCCGCTG GCGTCGTGCC GACCGACGCG GGCCTCGCGT TCTGGCGTCA GGCGCAACTC GCCCTCCGTC ACATCGACGA TGCCGCGCTC GCCGCGCGCT CCGCTCGTCT GTCCGGTCAC GTGAGCGTCG GTATGGCGCC GAGCACGGCG AGCGTGCTGG GCGTCGCGTT CATGAAGGCC ATGCGCACGC GTTATCCCGA AGTGCGGCTG CACATGGTCG AAAGCCTCTC CGGCTATCTC GCCTCCATGC TGAGCGCGCG GCAGATCGAT CTCGCCGTGC TGTTCCGCGA GGAGCCCGCG CAGAGCTTGA GCCTCATGCC GCTACTCGAC GAACGCCTGT TCCTGATCGG CGCGGGTGAG CTCGACGGCA TGCCCGTGGG CGCATCCGTG CGGCTGAAGA ATCTCGGCCG GCTGCCGCTC ATTCTGCCCA GTGGCGCGCA TGGGTTGCGC TCGCTGCTGG CATCGGCGTT CAAACGTGCC GAACACGAGC CGAATATCGT CGCCGAAGTG GATGGCCTCG CGCTGCTGAT GGACTTCGTG CGCAGCGGCT TGGGCGCGAC CATTCAGCCG GGCGCGGCGC TCGCCCGGCC TGAGAACCTG GTCCTGACGA GCGTGCCCGT GGCGGAGAAG TACGCCACGC GGCCCAACCT GATCGCCAGC ATCTCCGACG ACGAACTCTC ACCCGCAGGC CTCGCCGCCC GCGTCGTGCT CGCCGATGTC GTCCGTCAAC TCGTGCAAGA AGGCCGCTGG CCCGGCGCGC GGCTGCGCGA GCCGGGGTCT TCACAAAAAC TGAAGACCTC TTGA
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Protein sequence | MELRQLRYFL SVVKHGSMGK AALELGVVTS ALSQQISRLE GELSTRLLQR TSAGVVPTDA GLAFWRQAQL ALRHIDDAAL AARSARLSGH VSVGMAPSTA SVLGVAFMKA MRTRYPEVRL HMVESLSGYL ASMLSARQID LAVLFREEPA QSLSLMPLLD ERLFLIGAGE LDGMPVGASV RLKNLGRLPL ILPSGAHGLR SLLASAFKRA EHEPNIVAEV DGLALLMDFV RSGLGATIQP GAALARPENL VLTSVPVAEK YATRPNLIAS ISDDELSPAG LAARVVLADV VRQLVQEGRW PGARLREPGS SQKLKTS
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