Gene Bphyt_5627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5627 
Symbol 
ID6280120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1830835 
End bp1831788 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content66% 
IMG OID642616701 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001889344 
Protein GI187920313 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA GACAATTACG CTATTTTCTT AGCGTCGTGA AGCATGGAAG CATGGGCAAG 
GCAGCGCTGG AACTCGGCGT GGTCACATCG GCACTGAGTC AGCAGATCAG CCGGCTCGAA
GGCGAACTGT CCACGCGTCT GCTGCAACGC ACGTCCGCTG GCGTCGTGCC GACCGACGCG
GGCCTCGCGT TCTGGCGTCA GGCGCAACTC GCCCTCCGTC ACATCGACGA TGCCGCGCTC
GCCGCGCGCT CCGCTCGTCT GTCCGGTCAC GTGAGCGTCG GTATGGCGCC GAGCACGGCG
AGCGTGCTGG GCGTCGCGTT CATGAAGGCC ATGCGCACGC GTTATCCCGA AGTGCGGCTG
CACATGGTCG AAAGCCTCTC CGGCTATCTC GCCTCCATGC TGAGCGCGCG GCAGATCGAT
CTCGCCGTGC TGTTCCGCGA GGAGCCCGCG CAGAGCTTGA GCCTCATGCC GCTACTCGAC
GAACGCCTGT TCCTGATCGG CGCGGGTGAG CTCGACGGCA TGCCCGTGGG CGCATCCGTG
CGGCTGAAGA ATCTCGGCCG GCTGCCGCTC ATTCTGCCCA GTGGCGCGCA TGGGTTGCGC
TCGCTGCTGG CATCGGCGTT CAAACGTGCC GAACACGAGC CGAATATCGT CGCCGAAGTG
GATGGCCTCG CGCTGCTGAT GGACTTCGTG CGCAGCGGCT TGGGCGCGAC CATTCAGCCG
GGCGCGGCGC TCGCCCGGCC TGAGAACCTG GTCCTGACGA GCGTGCCCGT GGCGGAGAAG
TACGCCACGC GGCCCAACCT GATCGCCAGC ATCTCCGACG ACGAACTCTC ACCCGCAGGC
CTCGCCGCCC GCGTCGTGCT CGCCGATGTC GTCCGTCAAC TCGTGCAAGA AGGCCGCTGG
CCCGGCGCGC GGCTGCGCGA GCCGGGGTCT TCACAAAAAC TGAAGACCTC TTGA
 
Protein sequence
MELRQLRYFL SVVKHGSMGK AALELGVVTS ALSQQISRLE GELSTRLLQR TSAGVVPTDA 
GLAFWRQAQL ALRHIDDAAL AARSARLSGH VSVGMAPSTA SVLGVAFMKA MRTRYPEVRL
HMVESLSGYL ASMLSARQID LAVLFREEPA QSLSLMPLLD ERLFLIGAGE LDGMPVGASV
RLKNLGRLPL ILPSGAHGLR SLLASAFKRA EHEPNIVAEV DGLALLMDFV RSGLGATIQP
GAALARPENL VLTSVPVAEK YATRPNLIAS ISDDELSPAG LAARVVLADV VRQLVQEGRW
PGARLREPGS SQKLKTS