Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5592 |
Symbol | |
ID | 6278057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1790899 |
End bp | 1792035 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642616669 |
Product | protein of unknown function DUF214 |
Protein accession | YP_001889312 |
Protein GI | 187920281 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00756234 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGCA TCCTCCAACT CGCATTCAAG CTGCTCGTCA ACGACAGCGC CAAATTCACG GCACTGCTCG TCGGCATTAC ATTCGCGGTT TTTTTGATGG TCGAAATGAC TTCGCTGTTT GCCGGCATCC TGAACAAATC GTCGTCGACG GTGATCAATG TCGGGGCGAA GATGTGGGTG ATGGACCCGG CAGTGCAGAC CATCGCGAGC AGCATCGGCA TGCCGGATTA CGTACTCGAT GCGGTACGCA GCACCGACGG CGTCAAATAC GCGGTGCCGC TGTACTCAGG CACCGCGCTG GTCAAACTGC GCGACGGCAC CTATCAGGCA GTCACGGTGA TCGGACTCGA CGACGCCAGC CTGTTCGGCT GGCCGGTCAT GAAGCAGGGC AAGATCGAAG ACATTTACGC GGAGAATGGC TTTGTCGCTA TCGACGACGC CGAATTCGTC AAGCTGAAGA ACCCGACACT CGGCACCGAT TTCGAACTGA ACGACCATCG CGGCGTGATA GTCGGCATCG CGACGGTGGC GAGCAGCGGT CTCTTTGGCA CACCCACGCT CTACACCACT TACAAACGCG CCGTTACCTA TATCCCCACG ACCCGCTACA CGACCTCGTA CATCCTGGTT GAACCAAAAT CCGCTGCGGA TATCGCGCAC ATCAAACAGG TGGTGCAATC GCTCGGCTAC GTCGCGTTCA CGAAAAAGGA ATTCATGGCG CGCATTTCGC ATTTCTATAA ATACGAAACC GGCCTTGGCA CCAACATCAT GCTGATGACG GTCATCAGTT TCATTGTCGG GTTGTCCATC TCGGGGCAAA CGTTCTATAC GTTCATCCTC GAAAACCTCG AAAAGTTCGG TGCGCTGAAG GCGATTGGCG CGAAACGCCA TGAGCTGATC GCGATGATCC TGTTTCAGGC CACCTTTACG GCGCTGACCG GCTATGGCCT CGGCATCGGC CTGTGCGCGG CGCTGATCAG TCTCGCCAGG ATACGCATTC CCGATTACGC GGCAATCATC ACCTTCGGCA ATCTGGCGCT TGCGTTCGCC ATGGTGGTGG TGATTGCCGC GATGTCGAGC TACCTGGGCA TTCGACGCGT ATTGAGCATC GAACCCTTCG ATATTTTTCG GGGCTGA
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Protein sequence | MKGILQLAFK LLVNDSAKFT ALLVGITFAV FLMVEMTSLF AGILNKSSST VINVGAKMWV MDPAVQTIAS SIGMPDYVLD AVRSTDGVKY AVPLYSGTAL VKLRDGTYQA VTVIGLDDAS LFGWPVMKQG KIEDIYAENG FVAIDDAEFV KLKNPTLGTD FELNDHRGVI VGIATVASSG LFGTPTLYTT YKRAVTYIPT TRYTTSYILV EPKSAADIAH IKQVVQSLGY VAFTKKEFMA RISHFYKYET GLGTNIMLMT VISFIVGLSI SGQTFYTFIL ENLEKFGALK AIGAKRHELI AMILFQATFT ALTGYGLGIG LCAALISLAR IRIPDYAAII TFGNLALAFA MVVVIAAMSS YLGIRRVLSI EPFDIFRG
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