| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5567 |
|---|
| Symbol | |
|---|
| ID | 6277903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1770518 |
|---|
| End bp | 1770976 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642616646 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_001889289 |
|---|
| Protein GI | 187920258 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAA ACGTTCTGGT TGCCGTGGAT GGCAGCGAAG TATCGAAACG TGCGCTCAGT
GAGGCGATTC GGATGGCCAA ACTGGCGCGT GCGAAGCTGA CCGCGGTGTA TGCGATCGAC
CAGTCGGCGG CCTTTACCTA TGCAGGCGCC TGCGATCCCC ATCTGCTCAC CGATGCGGCG
CGCCAGGTCG GACGCAGCCT GCTGGACGAC GCGGTTGCGC AAATGAAAGC GCTCGACGTG
CCCGGAGATT CCGAAATCAT CGAAACCCAA GGCATAGCCG AAGACATCGC GAATTGCATC
GCGCGTTGCG TCGAGCGCCG CGGCGTGGAT CTGGTCGTGA TGGGCACGCA TGGCCGGCGC
GGCGTGCGCC GCATGGTGCT CGGCAGCGTC GCCGAGCGTT TCGTGCGGCT TTCTCCTTGC
CCCGTGCTGC TGGTACGGGA AAGCGTGGCC AACGCCTGA
|
|---|
| Protein sequence | MYENVLVAVD GSEVSKRALS EAIRMAKLAR AKLTAVYAID QSAAFTYAGA CDPHLLTDAA
RQVGRSLLDD AVAQMKALDV PGDSEIIETQ GIAEDIANCI ARCVERRGVD LVVMGTHGRR
GVRRMVLGSV AERFVRLSPC PVLLVRESVA NA
|
|---|
| |