| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5523 |
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| Symbol | |
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| ID | 6278485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1728414 |
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| End bp | 1729382 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616605 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001889248 |
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| Protein GI | 187920217 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.553864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGTCA ACTTCGATTT GAACGACTTG CAGGCGTTTC GCGCGGTGGT GGAGCTGGGG
AGCTTCCGCA AGGCCGCCGA GGCGGTCAGC ATCTCGCAGC CGGCCTTAAG CCGCCGCATC
GAAAAACTCG AGGAGGCGCT CGGTGTGCGT CTTTTCGAGC GCACCACGCG CAGTGTCACG
CTCACCACCG TGGGCCGTGT GTTCGCCCCG AGCGCGGAAC AACTGCTCAA CGATCTGGAC
GTCGCACTGC TCGGCATCCG CGATGTTTCT TCCAGCCGAA TGGGCCATGT GACGATCGCC
TGCGTGCCTT CGGTCGCCTA CTATTTTTTG CCGAACGTCA TCGCGAGCTA TCATCGCCGC
TTTCCGCGCA TCCGGGTCAA GCTGCTGGAT TCGAGCGCGA ATGAGGTGCT TGGTGCCGTC
ATCAGCGGTG AGGCCGACTT CGGCGTGAGT TTCATGGGCA GCCAGGAGTC CGAGGTCGAG
TTCAAGGTGC TGCTGCAGGA GCGCTTCGTT GCCGCTTGCC GTCGTGACCA CCCGCTCGCC
CTCAAGAAAC GCGTGACATG GAACGAGCTT TACGAGCACC AGTACGTGTC TCTTGACAAG
ACTTCCGGCA ACCGCCTTCT GCTCGACCAG GCGCTTTCGG CGGTAGCGCC GCGTGCACCG
AGCGTCTGCG AGACGCGCCA CGTCACCACC ATGCTCGGTC TGATCGAAGC GGGGCTGGGC
GTCGCCGCGG TGCCGTCGAT GGCCATGCCC GGACGCGAAC ACCCCATCCT CACAAGCGTG
CCGCTCGTCG AACCGGTGGT GAAGCGGCGA GTGGGCATCG TGACACGCCG CGGACGTCCG
CTTACACCGG CCGCGCTGGA GTTTCACAAA GCCGTTGTCG AGATGAGGCG CGGCGGCGTC
GCAAAGAGCG ACGCGTCGGA CAATGACGCG CCAGCGAAAA AGCAGCCAGG CGGGAAGACC
GCATCGTGA
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| Protein sequence | MGVNFDLNDL QAFRAVVELG SFRKAAEAVS ISQPALSRRI EKLEEALGVR LFERTTRSVT
LTTVGRVFAP SAEQLLNDLD VALLGIRDVS SSRMGHVTIA CVPSVAYYFL PNVIASYHRR
FPRIRVKLLD SSANEVLGAV ISGEADFGVS FMGSQESEVE FKVLLQERFV AACRRDHPLA
LKKRVTWNEL YEHQYVSLDK TSGNRLLLDQ ALSAVAPRAP SVCETRHVTT MLGLIEAGLG
VAAVPSMAMP GREHPILTSV PLVEPVVKRR VGIVTRRGRP LTPAALEFHK AVVEMRRGGV
AKSDASDNDA PAKKQPGGKT AS
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