| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5511 |
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| Symbol | |
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| ID | 6279346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1714514 |
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| End bp | 1715734 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616594 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001889237 |
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| Protein GI | 187920206 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.91473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.324907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCC GTCCTTTAGA AGGTATTCGC GTCGTCGACT ACAGCCACTT TCTGGCAGGT
CCGTACGTGG GACGGTGTCT CGCGGCGCTC GGCGCCGAAG TCATCAAGGT GGAGCGCCCC
GGCAACGGCG ACGCGGGGCG CCAGCATGCC ACCGTGCTCG ATGACGAACA AAGCGGCTAC
TTCCTGCAAC TCAACATGGG CAAGCGGGGC GTCAGCGTCA ACATGAAGGA CCCGCGCGGC
AAGGACTTCA TGCAGCGCCT GTGCGATTCG GCGGATGTGT TCGTCGAGAA CTACCGGCCA
GGCGCTCTGG ACAAGCTCGG GCTGGGCTAT ACGGAGCTGT CCGCGCGAAA TCCGCAACTG
GTGTACTGCT CGATCTCCGC CTATGGCCAT ACGGGACCGG ATGCGCATCG CGCCGGCTTC
GGCCTGATTG CAGAAGCGAA GAGCGGCATC ATGCAGATGA TCGGCACTCC CGGCGAGCCG
CCGCCGCTGA TGCGCATTTC GCTCGGCGAC ATGTACACGG GCATCCACGC CGTGGCGGCC
ATCAACGCCG CGCTGCTCGG TCGCGTGAAG AGCGGCCGGG GGCAGCACAT CGACATGGCG
CTCTACGACA CGCTGGTGTC GATGCACGAG TACGCAGTGC AGTGCTACAC GCTGCAAGGC
GTCGTTCCGG AACAGACTGG TCACGACATG CCCACTTCGA CGCTCTACGG TGTGTTCCGT
GCCGCCGATG GCGACCTCGT AATCGCGGCG CAGGTGGACG ACGCGTGGAA ACGCTTTGCC
GGCCTCGTCG AGGCCCATGG CGGACCGTCC GGCTTCGGAG CCGACACGCG CTTCCATGAC
GGCGCGGGGC GCAATGCCAA CCGGTTGGAG ATTCTGTCCG TGGTCCAGCC CTGGGTTGCC
AGCCGGCCGG TGGCCCAGGT GCTGGCACTG CTCGATGGCA TCGACGTGCC TTGCGCGAAG
GTACAGCGCA TCGACGAAGT GCTCGCCGAT CCGCAGATCG TCGCGCGGGG CATGGTGGTC
GAGCAGCAGC ATCCGCGCTA CGGCACGCTG CGTCTGCCGA ATCTGCCGTT CCGTTTCTCC
GATTGCGATA CGACGATCCG CGAGGTCGCG CCCGACCTTG GCCAGCACAA CGCGGAAGTC
GCGCGTTCAC TGGGCTTCGG CGCTGCCGAA ATCTACGCCA TGCAAACCGA CGGCGTGCTG
TTTTCAAACG CGAGGCCATG A
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| Protein sequence | MQARPLEGIR VVDYSHFLAG PYVGRCLAAL GAEVIKVERP GNGDAGRQHA TVLDDEQSGY
FLQLNMGKRG VSVNMKDPRG KDFMQRLCDS ADVFVENYRP GALDKLGLGY TELSARNPQL
VYCSISAYGH TGPDAHRAGF GLIAEAKSGI MQMIGTPGEP PPLMRISLGD MYTGIHAVAA
INAALLGRVK SGRGQHIDMA LYDTLVSMHE YAVQCYTLQG VVPEQTGHDM PTSTLYGVFR
AADGDLVIAA QVDDAWKRFA GLVEAHGGPS GFGADTRFHD GAGRNANRLE ILSVVQPWVA
SRPVAQVLAL LDGIDVPCAK VQRIDEVLAD PQIVARGMVV EQQHPRYGTL RLPNLPFRFS
DCDTTIREVA PDLGQHNAEV ARSLGFGAAE IYAMQTDGVL FSNARP
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