Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5502 |
Symbol | |
ID | 6277949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1705835 |
End bp | 1707001 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616585 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001889228 |
Protein GI | 187920197 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0812471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0619637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACTC AGGCATCCGT TACGACCGGC GGCACCGGTC CCGTCAAACT AACCAGCGCT CTGATCGCGC TTTTCGCATT CTGCTGCGGC GCGATCGTCG CCAACCTTTA CTACGCGCAG CCGATCACCG AGCTGATTGC GCCGGACATC CACATGTCCT CGGGCACGGC CAGCCTGATC GTGTCGCTCA CGCAGATCGG CTACGCATTC GGGCTGTTCT TTCTCGTGCC GCTTGGCGAT CTGCTTGAAA ATCGCAAGCT GATGATCACC ACCGCGCTCG TCTCGATCGT GAGTCTGGCT GCCGCGGCAT TCGCTCATCA GCCGGGCTGG TTCCTCGCAA TCTCGCTGAT GGTCGGCTTC AGCTCCGTTG CCGTGCAGAT CCTCATTCCG CTCGCCGCGC ATCTCGCGCC GGACGAGTCG CGCGGCAAGG TGGTGGGCAC CATCATGAGC GGCCTGCTGC TCGGCATTCT GCTGTCACGC CCGATCTCCA GCATCGTGGC CGGCCATTTC GGCTGGCGCG CAGTCTTTGG CGGAGCCGCC GTATTGATGG CCATCGTGAC CAGTGTCCTC GCGCTGACCA TCCCGCGCCG CCAGCCGGAG CATAAGGCGA CCTACTTCGA ATTAATCGGC TCGCTGGGCC ATCTGTTGCG GACAATGCCG GTGCTGCGCC ATCGCTCGCG ATATCAGGGA TTGATGTTTG CCTCGTTCAG CCTCTTCTGG ACGGCTATTC CTATCGAACT GACAAGACAG TTCGGGTTGT CCCAAACGGA GATCGGGATC TTCGCGCTGG TCGGCGCGAT CGGCGCGACC TCCGCACCGG TGGCGGGCCG CCTGGCCGAT GCAGGACACA CGGTACGCGC CACGCTGATC GCACTCGTGG TGGGCGCGCT GGCCTATACG CCTGCCCTGA TCCATCCGGC CTGGGGTGTA TTCGGACTCG TCGCAACCGG CATCGTGCTC GACTTCGCCG TGCAGATGAA CATGGTGCTG GGTCAACGCG AAATTTACGC GTTGCACGCG GCGAGCAGAA ACCGTCTGAA CGCGCTGTAT ATGACGAGCA TATTCGTGGG CGGCGCTTCG GTTCAGCGCT CGCGAGTCCG CTTTATCAGC ATGGCGGCTG GCCGCTCGTT GCAGGCGTCG CCACGGCTTT CCCGATCGCC GCTTTGA
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Protein sequence | MSTQASVTTG GTGPVKLTSA LIALFAFCCG AIVANLYYAQ PITELIAPDI HMSSGTASLI VSLTQIGYAF GLFFLVPLGD LLENRKLMIT TALVSIVSLA AAAFAHQPGW FLAISLMVGF SSVAVQILIP LAAHLAPDES RGKVVGTIMS GLLLGILLSR PISSIVAGHF GWRAVFGGAA VLMAIVTSVL ALTIPRRQPE HKATYFELIG SLGHLLRTMP VLRHRSRYQG LMFASFSLFW TAIPIELTRQ FGLSQTEIGI FALVGAIGAT SAPVAGRLAD AGHTVRATLI ALVVGALAYT PALIHPAWGV FGLVATGIVL DFAVQMNMVL GQREIYALHA ASRNRLNALY MTSIFVGGAS VQRSRVRFIS MAAGRSLQAS PRLSRSPL
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