| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5484 |
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| Symbol | |
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| ID | 6279693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1688880 |
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| End bp | 1689518 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616569 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001889212 |
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| Protein GI | 187920181 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.809178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.950879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTG CACTAATTGG CGCCACCGGC CGCACCGGCC GGCTGGTGGC GGAAAAGTTG
CACCGTGCGG GCACTCCGTT TCGTGCGTTG CTGCGCGACG AGGCTCGGCG AGCCCATTTC
GAAGGCCTCG GCGCGAGTCC CGTGATCGTC GACCTGACGC AGAACTTCGG CGCGGCGCTC
GCGGGGGTTC AGACAGTTAT CTTTGCCGCT GGATCCGCTG AAACCGAGGG CGCCGAGCAG
GAGCGTCAGA TCGATCGGGA CGCGATCATC AAGGCGGTCG ATTATGCGAA GCAAAATGGC
GCGGATCGCT TCATCGTCGT CAGCACCTTG CTGGCATACG CCCCTGAGCG CGCGCCAGAT
GAGCTTCGGC ATTACGCGCA GATGAAGCGC GCATCGGACG ATTATCTGAT CGGCAGTGGG
CTCGATTATC TCGTGCTGCG TCCCGGCACA CTGACCATGG AGCCGGGTGC CGGGACAATT
GAAATCGTGG CCGACGCGCA GTCCGCTCGT GCCCCCATTG CGCGTGAGGA TGTTGCCGAA
GTCGTGCTCG AAGCGCTCAG GGTGGGCCTT GTCAACAAGA TCGTCGGGTT TGCCGGTGGC
AGTCAACCGA TAGCCGACGC ATTGGCCTCG CTCCATTGA
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| Protein sequence | MSIALIGATG RTGRLVAEKL HRAGTPFRAL LRDEARRAHF EGLGASPVIV DLTQNFGAAL
AGVQTVIFAA GSAETEGAEQ ERQIDRDAII KAVDYAKQNG ADRFIVVSTL LAYAPERAPD
ELRHYAQMKR ASDDYLIGSG LDYLVLRPGT LTMEPGAGTI EIVADAQSAR APIAREDVAE
VVLEALRVGL VNKIVGFAGG SQPIADALAS LH
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