Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5471 |
Symbol | |
ID | 6280372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1676326 |
End bp | 1677888 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642616556 |
Product | ABC transporter related |
Protein accession | YP_001889199 |
Protein GI | 187920168 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.428158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACGA GATTGACGAA TGCCACGCAG CGCGGGCCCG GTCCCGCGGC TGAGCCTGAG CCGCCTGTAT CCCGCGAGAT CTTGCAACTG AAAGGTGTGA GCAAGCGCTT TCCAGGGGTC GTCGCCCTCG ATGGCATCGA CCTCGATCTG TGCGCCGGCG AAGTCCATGC CGTGTGCGGC GAAAACGGCG CGGGCAAGTC GACATTGATG AAAATCATTA GCGGCCAGTA TCGCGCGGAT GAAGGCGTGG TCCGCTACCG CGGTGCGCCC GTGCAGTTCT CTTCCACCTC CGACGCGCAG GCGGCAGGCA TTGCGATCAT TCACCAGGAA CTGAACCTCG TCCCGCACCT CTCGGTCGCG GAAAACATCT ACCTTGCGCG CGAACCCAAA CGCGGCCCGT TCGTGGATTA CCGCACGCTG AATAGCAATG CGCAGCGGTG TCTGCAACGC ATCGGGCTGA ACGTGTCGCC GAGCACGCTC GTCGGCGCGC TTTCGCTTGC GCAACAGCAG ATGGTGGAGA TTGCGAAGGC ACTGTCGCTA GATGCGCGCG TGCTCATCAT GGACGAACCC ACCTCCTCGC TGACCGAATC GGAAACGGTC CAACTGTTCC GCATCATCAG GGAACTGCGC GCTGGCGGGG TGGCGATTCT TTACATCTCG CATCGGCTCG ATGAGATGGC TGAGATCGTG GACCGCGTTA CGGTGCTGCG CGACGGCCGT CACATTGCAA CGAGCGATTT CGCCTCGACC ACGGTCAACG AAATCGTGGC CCGAATGGTC GGTCGCCCGC TCGACGATGC CTATCCGCCA CGCCAGTCCA CTCCCTCTAA TCAGATCCTG CTGCGCGTGC GCGACCTGCA AAGGACAGGC GTTTTCGGCC CGCTTTCGTT CGAACTGCGC AAGGGCGAGA TTCTAGGCTT CGCGGGTCTG ATGGGCGCGG GGCGGACCGA AACCGCCCGC GCGATCTTCG GCGCCGAGCG GCCCGATTCC GGTTCGATCA CGCTCGGCGA CGAGCCTGTC ACGATCGGTT CACCGCGCGA GGCCATTCGA CACGGGATCG CATACCTGTC CGAAGACCGC AAGAAAGACG GCCTCGCCCT CTCGATGCCG GTTTCCGCAA ACATCACGCT GGCCAACGTC CGGGCCATTT CGTCGCGCGG CTTTCTGCGT TTCTCCGAAG AAACGGCCAT CGCCGAGCGC TACGTTCGCG AACTCGGCAT CCGTACACCG ACGGTCAAGC AGATCGCGAG AAATCTGTCC GGTGGCAATC AACAGAAGAT CGTCATCAGC AAATGGCTGT ACCGCGGCTC GCGCATTCTG TTTTTCGACG AGCCCACCCG CGGTATCGAC GTCGGCGCGA AATACGCGAT TTACGGCCTG ATGGACAGAC TCGCGGCGGA CGGCGTCGGT GTCGTCCTGA TCAGTTCGGA GCTGCCCGAA CTGCTTGGCA TGACTGATCG TATCGCCGTG TTTCATGAAG GGCGTATCAC CGCGGTCCTT GAGACCAGAC AGACCAGTCA GGAGGAGATC TTGCACCATG CATCAGGGAG AAGTCATGCT TGA
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Protein sequence | METRLTNATQ RGPGPAAEPE PPVSREILQL KGVSKRFPGV VALDGIDLDL CAGEVHAVCG ENGAGKSTLM KIISGQYRAD EGVVRYRGAP VQFSSTSDAQ AAGIAIIHQE LNLVPHLSVA ENIYLAREPK RGPFVDYRTL NSNAQRCLQR IGLNVSPSTL VGALSLAQQQ MVEIAKALSL DARVLIMDEP TSSLTESETV QLFRIIRELR AGGVAILYIS HRLDEMAEIV DRVTVLRDGR HIATSDFAST TVNEIVARMV GRPLDDAYPP RQSTPSNQIL LRVRDLQRTG VFGPLSFELR KGEILGFAGL MGAGRTETAR AIFGAERPDS GSITLGDEPV TIGSPREAIR HGIAYLSEDR KKDGLALSMP VSANITLANV RAISSRGFLR FSEETAIAER YVRELGIRTP TVKQIARNLS GGNQQKIVIS KWLYRGSRIL FFDEPTRGID VGAKYAIYGL MDRLAADGVG VVLISSELPE LLGMTDRIAV FHEGRITAVL ETRQTSQEEI LHHASGRSHA
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