| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5453 |
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| Symbol | |
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| ID | 6278317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1651285 |
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| End bp | 1655799 |
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| Gene Length | 4515 bp |
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| Protein Length | 1504 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616538 |
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| Product | DEAD/H associated domain protein |
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| Protein accession | YP_001889181 |
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| Protein GI | 187920150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.397244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCGC CGCCTCTGGA TATGGCACGT CCCGCCCCCA ACTATGCAAG CATGACTTCG
GCTTCCTCCA CCACCGCTGC CTTGGGCGCG GCACCCGCCG CCACATCCGT CGCGACGCCC
GCTATCGGGC TCTCGACGGC CGGCGCGCTC GCCGATTTCC ATCCCGCGGT CGCGAGCTGG
TTCCTCAAAA CCTTCCCCGC GCCGACCGAC GCCCAGGCCG CCGCGTGGCC GCAGATTCGT
CGCGGCCGCT CGACGCTGGT GGCCGCGCCG ACCGGTTCGG GCAAGACGCT CACCGCCTTC
CTGTCCGCGC TCGACGATCT GGTCCAGCAA GGCCTCACCA ACGGCGGCGC ATTGCCGGAC
GAAACGCTGG TGGTCTACGT GTCGCCGCTG AAGGCGCTCT CCAACGACAT CCGCCTCAAT
CTGCAAATAC CGCTGCAAGG CATCGCCGCG GAACTCGACG CGCGAGGCTT GCCGCCGCTG
GATATCCGCA CCGCCGTGCG AACCGGCGAC ACCACCCAGC GGGAACGCAA CGCGCTGAAA
AAGCGCGCGC CGCATATTCT GGTCACCACG CCGGAATCGC TTTACGTGCT GCTCGGTTCG
GACTCCGGCC GCCGCATGCT CTCGACCGTG CGCACGGTGA TCGTCGATGA AATTCACGCG
CTCGCCGGCG GCAAGCGCGG CAGCCATCTG GCGCTCAGCC TGGAACGGCT CGATGCGCTG
TGCCAGCGGC GCTTGCCGCG TATCGGTCTG TCGGCGACGC AAAAACCGGT GAGCGCGGTC
GCGCGCTTTC TGGTGGGCGG CGGCAGCATC GACAGCGGCA TTCCCGCCGA TTGCGCGATC
GTCGACGTGG GTCATATTCG CGAACGCGAT CTGGCGCTCG AGATTCCGCC CGTGCCGCTC
GAAGCGGTCA TGCCCAACGA AGCGTGGGAG CGCGTCTACG ATCGTCTCGC CGAACTGGTG
GCGATGCATC GCACCACGCT GATTTTCGTC AACACACGCC GCATGGCCGA GCGTGCCGCG
CGTCATCTCA CCGAACGGCT GGGCAAAGAC GCGGTCGCCG CGCATCACGG CAGCCTCGCG
AAAGAACATC GTTTCGATGC CGAACAGCGC CTGAAACGCG GCGAACTGCG CGTGCTGATC
GCCACGGCTT CGCTGGAACT CGGCATCGAT ATCGGCGACG TCGATCTGGT TTGCCAGATG
GGTTCGCCCC GCGCGATCGC GCCGTTCCTG CAACGCGTCG GACGCTCGGG ACACCATGTC
GGCGGCATGC CGAAAGGCAG GCTGTTTCCG AATTCGCGCG ACGATCTGAT CGAATGCGCC
GCGCTGCTCG ATTGCGTGCG GCGCGGCGAA CTCGACGCGC TGCGCATTCC GCGCGCGCCG
CTCGATGTGC TGGCCCAGCA GATCGTCGCG GAAGTATCGA GCGCCGAGTG GAACGAAGAC
GCGTTGTTCG AACTCATGCG GCGCGCCGCC CCCTACGCGG ACCTGACGCG TGAGCAGTAC
GACGCCGTGC TGCACATGCT CGCCGAAGGC TACACGAGCC GCAACGGTCC GCGTGCCGCT
TACGTTCATC GCGACGTGGT GAGCGGCACG CTGCGCGGCC GGCGCGGCGG CAAGCTGGTC
GCGGTCACGT CGGGCGGCAC AATTCCCGAG AACGCCGACT ACGCCGTGGT GCTCGAACCG
CAAGCGATCA ACATCGGCAC CGTCAACGAG GATTTCGCCG TCGAAAGTCT GGCCGGCGAC
GTGTTTCAAC TCGGCAATGC GTCGTACCGG ATACTGCGGA TCGAAAGCGG GCGCGTGCGG
GTCGAGGACG CGCAGGGACA GCCGCCGAAC ATTCCGTTCT GGCTCGGCGA AGCGCCGGGG
CGCAGCGACG AGTTGTCGTT CGGCGTCGCG CGTTTGCGCG AACAGATCGG GCGTCTTCTC
GACGATAACA AGGCGGCGAA GGAAACCGAC ACCGCAGCAG AAACGCTACC CGCCCGCATT
GACCAAGCGA TCGACTGGCT GGTCGACAAC CTGCATCTCG ACGAAGCCGC CGCGCGCCAG
ATCGTCGACT ACCTCGCCCG CGCGCGCGCC GCGCTCAGCG TGCTGCCGAC GCAAAATACA
CTGGTCATGG AGCGTTTCTT CGACGAATCC GGCGGCACGC AGCTCGTGAT CCACGCGCCG
TTCGGCAGCC GCGTCAACCG CGCGTGGGGC CTCGCGCTGC GCAAACGGTT TTGCCGCACT
TTCAACTTCG AGCTGCAAGC CGCCGCCACC GAGGACGCGA TCGTGCTGTC GCTGACCAGC
AGCCATTCCT TCGTGCTCGA CGAAGTATGG CGTTATCTGC ATTCGAACAG CGCCGAGCAT
CTGCTGATTC AGGCGCTGCT CGATGCGCCG CTGTTCGGCG TGCGCTGGCG CTGGAACGCG
ACCACCGCGC TCGGCCTGCC GCGCTACACC GGCGGGCGCA AAACCGCGCC GCAATTGCAG
CGCATGCGCA GCGAGGATCT GCTGGCGAAC GTGTTTCCCG AACAGGCCGC GTGTCTTGAG
AACGTGGTCG GCGAACGGGA ACTGCCGCAC CATCCGTTAG TGGACCAAAC CGTCGACGAC
TGTTTGCACG AAGCGATGGA CAGCGAACGC TGGCTCGCGC TGCTGCGCCG TATCGAACAG
GGCGACGTGC AACTGGTCGC GCGCGATTTG CCGGCGCCCT CGCCGCTCGC CGCCGAAATC
CTCAACGCGA AACCGTACGC CTATCTGGAC GACGCGCCGA TCGAGGAGCG CCGCACGCAA
GCCGTGCTGA ACCGCCGCTG GACCGACCCG TCGAGTGCCG ACGATCTCGG TGCGCTCGAC
GCGGAGGCGA TCGAAAGCGT GCGCGACGAG GCGTGGCCGC AAGCGCGCAA CGCCGATGAA
ATGCACGAAG CGTTGACCGG ACTTGCGTGC ATCACCGAGA GCGAAGCGCG CCGCAACGAA
GGCTGGCCGG CCTGGCTTGC GTCGTTGGCT GAATCCGGGC GCGCCACCCG CTTGCAGCTC
GCCCACGATT GCGCCCTGTG GCTGCCGGTC GAACGCGTCA CCTGTTTTCA GGCGCTCTAT
CCGCCCGCTG AATTCGCGCC GGCGCTCGCC GCGCCGAAAG GCTACACAGA AAGCTGGAAC
GCCGACGACG CACTCATCGA CGTGCTCCGT GCGCGTCTGA CCGGCTTCGG CCCGCTGCCT
GTCGACGCGA TTGCCGAAGC GCTGAAGCTG CCGGCCGCAT CGGTCGAACA GAGCCTGACG
CGCCTCGAAG CCGAAGGCTA CGTGATGCGC GACCGCTTCA CGCCGCAAGC CGCCGAAGAA
GAATGGTGCG AACGGCACCT GCTCGCACGG ATACACCGTT ACACCGTGAA ACGCTTGCGG
CGCGAGATCG AACCGGTGGA ACGGCACGAC TTCATGCGCT TTCTGTTCGA GTGGCAGCAT
CTGACGCCGG ACACGCGCAG CGAGGGGCGC GAGGCGCTGG CCGCGGTCCT CGAACAGCTC
GAAGGCTTCC AGGCCGCGGC GGCCGCCTGG GAGGAAGACA TCCTGCCCGC ACGCGTGAAG
GCCTACACGA ATACTTCGCT CGACGAACTA TGCCGGGCCG GCAAGATAGT CTGGACGCGC
CTGACGGAAC GCGCGCGCGG CGCCGCCGGG CCGATCCGCA GTACGCCGAT CGTGCTGCTG
CCGCGCGCGC AAGTGCGCCT ATGGAGCGCG TTGCTCGATC CGTCGAAACA ACCGGAGTTG
TCGGCGCGCG CGCAAAGCGT GTATGACACG CTCGTGCAAC ACGGCGCGAT GTTCTTCGAC
GAATTGCTCG CCGAAGTTCG CGTATTGCGT ATGGAGTTGG AGAGCGCGCT GGGCGAGCTG
GTGGCCGCGG GTCTCGTGAA CTCGGACAGC TTCGCGGGCT TGCGCGCCTT GCTGAAGCCG
GTCGCCAAAC GCAACGCGTT TTCCAGCAAC CGGCGCGCGC GTTCGAGCGC GCTGATCGGC
GGTATGGACG ACGCCGGACG CTGGGCGCTG GTCAACCGCC CCTCCACTGG TGCTGCGGCA
GAGCCTGTGC CGGAGCGCCG CCGGCAATTG CCGCCCGAAG TACTCGAACA CGTCGCAATG
ACGCTGTTGC GCCGTTATGG TGTGGTGTTC TGGCGTCTGC TCGAACGCGA AGCCGAGTGG
CTGCCGCCGT GGCGCGACCT GCTGCGCGTT TTTCAGCGGC TCGAAGCGCG TGGCGTGATT
CGCGGCGGAC GCTTTGTGAA TGGCCTCGCC GGCGAACAAT TTGCGCTGCC CGAAGCGATT
CCCGTGCTGC GAGAAGTTCG GCGGCATGCG AACGACGGTG CTTTTGTCTG CGTCGCCGGA
ACTGATCCGT TGAATCTGGC GGGTACTTTG CTGGTCGGCG AACGTGTACC CGCAGTAGCG
GGAAACCGGA TTCTGTATCG CGACGGCGTC GTGGCGGCCA CGCTCGTCGC GGGGACTTTC
TGGTTCGACG CGTTACTGGA AACGGTTCCC GCAGAAAGGG AGCGGGCTCG CGCGTGGCTG
GCGCGGCGAT TTTAG
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| Protein sequence | MLSPPLDMAR PAPNYASMTS ASSTTAALGA APAATSVATP AIGLSTAGAL ADFHPAVASW
FLKTFPAPTD AQAAAWPQIR RGRSTLVAAP TGSGKTLTAF LSALDDLVQQ GLTNGGALPD
ETLVVYVSPL KALSNDIRLN LQIPLQGIAA ELDARGLPPL DIRTAVRTGD TTQRERNALK
KRAPHILVTT PESLYVLLGS DSGRRMLSTV RTVIVDEIHA LAGGKRGSHL ALSLERLDAL
CQRRLPRIGL SATQKPVSAV ARFLVGGGSI DSGIPADCAI VDVGHIRERD LALEIPPVPL
EAVMPNEAWE RVYDRLAELV AMHRTTLIFV NTRRMAERAA RHLTERLGKD AVAAHHGSLA
KEHRFDAEQR LKRGELRVLI ATASLELGID IGDVDLVCQM GSPRAIAPFL QRVGRSGHHV
GGMPKGRLFP NSRDDLIECA ALLDCVRRGE LDALRIPRAP LDVLAQQIVA EVSSAEWNED
ALFELMRRAA PYADLTREQY DAVLHMLAEG YTSRNGPRAA YVHRDVVSGT LRGRRGGKLV
AVTSGGTIPE NADYAVVLEP QAINIGTVNE DFAVESLAGD VFQLGNASYR ILRIESGRVR
VEDAQGQPPN IPFWLGEAPG RSDELSFGVA RLREQIGRLL DDNKAAKETD TAAETLPARI
DQAIDWLVDN LHLDEAAARQ IVDYLARARA ALSVLPTQNT LVMERFFDES GGTQLVIHAP
FGSRVNRAWG LALRKRFCRT FNFELQAAAT EDAIVLSLTS SHSFVLDEVW RYLHSNSAEH
LLIQALLDAP LFGVRWRWNA TTALGLPRYT GGRKTAPQLQ RMRSEDLLAN VFPEQAACLE
NVVGERELPH HPLVDQTVDD CLHEAMDSER WLALLRRIEQ GDVQLVARDL PAPSPLAAEI
LNAKPYAYLD DAPIEERRTQ AVLNRRWTDP SSADDLGALD AEAIESVRDE AWPQARNADE
MHEALTGLAC ITESEARRNE GWPAWLASLA ESGRATRLQL AHDCALWLPV ERVTCFQALY
PPAEFAPALA APKGYTESWN ADDALIDVLR ARLTGFGPLP VDAIAEALKL PAASVEQSLT
RLEAEGYVMR DRFTPQAAEE EWCERHLLAR IHRYTVKRLR REIEPVERHD FMRFLFEWQH
LTPDTRSEGR EALAAVLEQL EGFQAAAAAW EEDILPARVK AYTNTSLDEL CRAGKIVWTR
LTERARGAAG PIRSTPIVLL PRAQVRLWSA LLDPSKQPEL SARAQSVYDT LVQHGAMFFD
ELLAEVRVLR MELESALGEL VAAGLVNSDS FAGLRALLKP VAKRNAFSSN RRARSSALIG
GMDDAGRWAL VNRPSTGAAA EPVPERRRQL PPEVLEHVAM TLLRRYGVVF WRLLEREAEW
LPPWRDLLRV FQRLEARGVI RGGRFVNGLA GEQFALPEAI PVLREVRRHA NDGAFVCVAG
TDPLNLAGTL LVGERVPAVA GNRILYRDGV VAATLVAGTF WFDALLETVP AERERARAWL
ARRF
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