| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5403 |
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| Symbol | |
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| ID | 6279642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1594808 |
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| End bp | 1595371 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642616488 |
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| Product | peroxiredoxin |
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| Protein accession | YP_001889131 |
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| Protein GI | 187920100 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000123087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.352797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGATCA TCAACAGTCA AGTCAAACCG TTCAAGGCGC AGGCTTATCA CAATGGCGAT
TTTCAGACCG TCACGGAAGA AAGCCTGAAG GGCAAGTGGT CGGTGTTCGT TTTCTACCCG
GCTGACTTCA CCTTCGTGTG CCCGACCGAA CTGGGCGACC TGGCAGACCG TTACGACGAA
TTCCAGAAGC TCGGCGTCGA AATCTACAGC GTGTCGACCG ATACGCACTT CACGCACAAG
GCATGGCACG ACACGTCGGA TACGATCCAG AAGATCAAGT ACCCGATGAT CGCCGACCCG
ACGCTGGCCA TCTCGCGCAA CTTCGACGTG CTGATCGAAG AAGAAGGCCT GGCACTGCGC
GGCACGTTCG TGATCAACCC GGAAGGCGAA ATCAAGCTGG CCGAAATTCA CGACAACGGC
ATTGGCCGTG ACGCCGGCGA ACTGCTGCGC AAGGTGCAAG CTGCGCAATA CATCGCGGCT
CACCCGGGTG AAGTGTGCCC TGCCAAGTGG ACGCCGGGTG CAGAAACGCT GACCCCGTCG
CTCGACCTGA TCGGCAAGAT CTAA
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| Protein sequence | MPIINSQVKP FKAQAYHNGD FQTVTEESLK GKWSVFVFYP ADFTFVCPTE LGDLADRYDE
FQKLGVEIYS VSTDTHFTHK AWHDTSDTIQ KIKYPMIADP TLAISRNFDV LIEEEGLALR
GTFVINPEGE IKLAEIHDNG IGRDAGELLR KVQAAQYIAA HPGEVCPAKW TPGAETLTPS
LDLIGKI
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