Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5400 |
Symbol | |
ID | 6280149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1591122 |
End bp | 1591535 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642616485 |
Product | DoxX family protein |
Protein accession | YP_001889128 |
Protein GI | 187920097 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0358694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0708806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTATA CGCTGTTTGA AAATCAGAAG GACGCGGTCA TCCTCGTCGC CCGTGTTCTG TTGATGGTGC TGTTCGTCAT GTTCGGCTGG TCCAAGCTCA CGGGCTTCTC CGGCACCGTG GCTTATATGA CGTCGAGCGG CGCGCCGGTG CCCGAGTTGT CGGCGGTGAT CGCCGTGGTA ATGGAGTTCG TTGTTGGCAT CGCGCTGCTG GTCGGTTTCT TCACGCGGCC GCTTGCGTTG CTGCTCGCGG TTTATACGCT CGGCACCGCG TTTATTGGCC ATCATTACTG GAACATGACC GGCGCGGTGC AGTACGACAA TATGATTCAC TTCTACAAGA ACATCAGCAT CATCGGCGGA CTGTTGCTGT TGTGTGTGAC GGGCGCCGGG AAGTATTCGA TTGATCGGCG TTGA
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Protein sequence | MRYTLFENQK DAVILVARVL LMVLFVMFGW SKLTGFSGTV AYMTSSGAPV PELSAVIAVV MEFVVGIALL VGFFTRPLAL LLAVYTLGTA FIGHHYWNMT GAVQYDNMIH FYKNISIIGG LLLLCVTGAG KYSIDRR
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