Gene Bphyt_5400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5400 
Symbol 
ID6280149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1591122 
End bp1591535 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID642616485 
ProductDoxX family protein 
Protein accessionYP_001889128 
Protein GI187920097 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0358694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0708806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATA CGCTGTTTGA AAATCAGAAG GACGCGGTCA TCCTCGTCGC CCGTGTTCTG 
TTGATGGTGC TGTTCGTCAT GTTCGGCTGG TCCAAGCTCA CGGGCTTCTC CGGCACCGTG
GCTTATATGA CGTCGAGCGG CGCGCCGGTG CCCGAGTTGT CGGCGGTGAT CGCCGTGGTA
ATGGAGTTCG TTGTTGGCAT CGCGCTGCTG GTCGGTTTCT TCACGCGGCC GCTTGCGTTG
CTGCTCGCGG TTTATACGCT CGGCACCGCG TTTATTGGCC ATCATTACTG GAACATGACC
GGCGCGGTGC AGTACGACAA TATGATTCAC TTCTACAAGA ACATCAGCAT CATCGGCGGA
CTGTTGCTGT TGTGTGTGAC GGGCGCCGGG AAGTATTCGA TTGATCGGCG TTGA
 
Protein sequence
MRYTLFENQK DAVILVARVL LMVLFVMFGW SKLTGFSGTV AYMTSSGAPV PELSAVIAVV 
MEFVVGIALL VGFFTRPLAL LLAVYTLGTA FIGHHYWNMT GAVQYDNMIH FYKNISIIGG
LLLLCVTGAG KYSIDRR