| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5375 |
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| Symbol | |
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| ID | 6279626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1560064 |
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| End bp | 1560540 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642616461 |
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| Product | protein of unknown function DUF796 |
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| Protein accession | YP_001889104 |
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| Protein GI | 187920073 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.330014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.367426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGG ATACGTTCAT CAAGATTAAC GGCTGCGACG GCGAATCGCA GGATGCCTCG
CATCTGAACG AAATCGACGT AATCGGTTGG CGTTGGAAGA TTTCACAGGA CTCGACCATG
ATGGCGGGCT CCGGCGGCGG CGCGGGCAAG GCTAGCGTTT CCGATCTGGA ATTCACGCAC
AAGCTGGACC GAGCCAGTCC GAACCTGGCC AAATATTGCT TCACCGGCAA GCATGTGGAC
CAGGTGAAGC TGACTGTGCG AAAGGCCGGG GGCATGCCGT TCGAATACCT GAAGATCACG
ATGTACGACG TGATCATTAC CCAGGTGGAA CCGATCGGCG GCGGCGACGA GTGCCATGAA
GATGTTCACC TGTCTTTCTC GACGATGAAG CATGAGTACT TCGTGCAAAA CGCGCTGGGA
GGGAGCGGCG GTGCGGTGAC TGCCACTCTG TATATCAAGA ACAACACGAC GAATTGA
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| Protein sequence | MAQDTFIKIN GCDGESQDAS HLNEIDVIGW RWKISQDSTM MAGSGGGAGK ASVSDLEFTH
KLDRASPNLA KYCFTGKHVD QVKLTVRKAG GMPFEYLKIT MYDVIITQVE PIGGGDECHE
DVHLSFSTMK HEYFVQNALG GSGGAVTATL YIKNNTTN
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