Gene Bphyt_5353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5353 
Symbol 
ID6277512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1536330 
End bp1536965 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID642616439 
ProductCarbonate dehydratase 
Protein accessionYP_001889082 
Protein GI187920051 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.599954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGAAA TCATCGAAGG TCTCATCCGC TTTCAACAGG AAGTCTTTCC GCAGCAGAGC 
GCATTGTTCA AGCGCCTGTC GATGGCGCAA AGTCCCAGCA CGCTTTTCGT GACGTGCTCG
GACAGCCGTG TCGTGCCCGA GTTGCTGACG CAGACCGAGC CCGGTTCGCT GTTCGTGATC
CGCAACGCGG GCAATATCGT GCCGTCGTAT GGCCCGGAGC CGGGCGGCGT GTCGGCGACC
GTCGAGTACG CGGTGGCCGT GTTGGGCGTG CGCGATATCG TGATTTGCGG CCACTCGAAT
TGCGGTGCAA TGACGGCAAT CTCGACCTGC AAGAATCTCG ATCATCTGCC GGCGGTGGCG
GGCTGGCTGC GTCACGCGGA TGCGGCCAAG GCCATCAACG CATCACGCAC TTACCATTCG
GACGCCGAGT GTCTCTCCGC GCTGGTCAAG GACAACGTGA TTGCGCAACT CGCGAACATC
CGCACGCATC CTTCGGTGGC AGTCGGGCTC GCGAACAAAA CGCTGCGGCT GCACGGCTGG
ATCTTCGATA TCGAAACCGG CACGATGCTC GCGCTCGACG GACCTAGCGG AAAATTCTTG
CCGCTGGTGG ACAACCCGGA CATCTACGCC GTCTAA
 
Protein sequence
MQEIIEGLIR FQQEVFPQQS ALFKRLSMAQ SPSTLFVTCS DSRVVPELLT QTEPGSLFVI 
RNAGNIVPSY GPEPGGVSAT VEYAVAVLGV RDIVICGHSN CGAMTAISTC KNLDHLPAVA
GWLRHADAAK AINASRTYHS DAECLSALVK DNVIAQLANI RTHPSVAVGL ANKTLRLHGW
IFDIETGTML ALDGPSGKFL PLVDNPDIYA V