| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5293 |
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| Symbol | |
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| ID | 6278390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1473029 |
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| End bp | 1474177 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616379 |
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| Product | putative exonuclease involved in mRNA processing |
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| Protein accession | YP_001889022 |
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| Protein GI | 187919991 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTATAG CCTCTGACGC ATCAGATCTC GCGGACCTCG TGGTGGCGCG GCCGGAGGGA
TTGTATTGTC CGACTGGCGA CTTCTATATC GATCCGTGGC GTCCCGTCGA ACGCGCGGTG
ATCACGCATG CCCATTCCGA CCACGCGCGC TTTGGGCACC GGCACTACCT CGCTTCGCAA
GCAGGGGCCA ATGTGCTGCT GTCGCGTTTG CCCGGCATAT CATTGCAAAC CCTGGCGTAT
GGCGAGCGCC TCGATCTCAA CGGCACCACC GTGTCGCTGC ATCCCGCAGG GCATGTGCTC
GGCTCCGCGC AAGTGCGGAT CGAGCATCGC GGTCGCGTGT GGGTCGCCTC GGGCGACTAC
AAGCTCGACC CCGACCCGAC CTGCGATGCC TTCGAGCCGG TTCGCTGCGA CACCTTCATT
ACCGAGTCGA CCTTCGGCCT GCCGATCTAC CGGTGGGACG CGCCGCAAAC CATCTTCGAC
GGCGTCGATT CGTGGTGGCG TCATAACGCA GCCGAAGGAC GCGCTTCCGT ACTGTTTTGC
TATTCGTTCG GCAAGGCGCA GCGCGTGCTC GCGAGTGTCG ATGCGGGCAT TGGGCCGATT
TTCTGTCACG GCGCCGTGGA GCCGCTCAAT CGCGCGTATC GCGACGCCGG CGTGCAGTTG
CCGCCGGTGC GGCCCGTGAG CGAGATACCG GTCAAGGACA AGGCGGCGTT CCGCCAGGCA
TTGATCGTGG CGCCGCCGTC CGCTCAAGGC AGCGCATGGC TCAAGCGCTT TGGCGACTAT
AGCGATGCGT TCGCGTCAGG CTGGATGCGT CTGCGCGGCG CGCGTCGCAG ACGCGGTGTC
GACCGTGGCT TCGTACTGTC GGATCACGCC GATTGGCCCA GCCTGCAAAC GGCCATTCAG
GCGACGGGCG CCGAACGCGT GATCGTCACG CACGGTTCGG TGGAACCGAT GGTGCGATGG
TTGCGCGAGC AAGGCCTCGA GGCGGGCGCA TTTGAAACGC AATACGGCGA CGATACAGTC
GAAGCCGATG CCGCGGGCGC GGATGAAACC GCCGCGACTG GCAGTGTGCC GCACGAGTTC
GCGCAGGCCG CCGAGCGCGA TGCCTCCACT GATGACACAG CCGCGGCCAA CCCGTCGAGC
CGCGTATGA
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| Protein sequence | MTIASDASDL ADLVVARPEG LYCPTGDFYI DPWRPVERAV ITHAHSDHAR FGHRHYLASQ
AGANVLLSRL PGISLQTLAY GERLDLNGTT VSLHPAGHVL GSAQVRIEHR GRVWVASGDY
KLDPDPTCDA FEPVRCDTFI TESTFGLPIY RWDAPQTIFD GVDSWWRHNA AEGRASVLFC
YSFGKAQRVL ASVDAGIGPI FCHGAVEPLN RAYRDAGVQL PPVRPVSEIP VKDKAAFRQA
LIVAPPSAQG SAWLKRFGDY SDAFASGWMR LRGARRRRGV DRGFVLSDHA DWPSLQTAIQ
ATGAERVIVT HGSVEPMVRW LREQGLEAGA FETQYGDDTV EADAAGADET AATGSVPHEF
AQAAERDAST DDTAAANPSS RV
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