| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5282 |
|---|
| Symbol | |
|---|
| ID | 6279611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1459112 |
|---|
| End bp | 1459531 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642616368 |
|---|
| Product | protein of unknown function UPF0047 |
|---|
| Protein accession | YP_001889011 |
|---|
| Protein GI | 187919980 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.421624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACAAG CCATCCACCA TCTGAGCGTC AAGGCCCGCA ACCGTGGCCT CGTCGAATTC
ACCGACGAAG CGCGCCGCTT CGTCGCCGCG CAAGGCATCG AAACAGGCCT GCTGACGCTG
TTCTGCCGCC ATACGTCCGC CTCATTGCTG ATTCAGGAGA ACGCCGACCC TTCCGTGCAA
CGCGATCTGG AGCGGTACTT CGCGACCCTC GCGCCCGAAG ACGCCGAGCG TTACGAACAC
GACGCCGAAG GCACGGATGA CATGCCGGCC CATTTGCGCA CCGCGCTCAC GCAAGTGCAA
CTGTCGGTGC CGGTCGAACA CGGGCAGATG GTGCTCGGCA CGTGGCAAGG CCTATATCTG
TTCGAGCATC GCCGACACAC GCAGCAGCGT GACATCGTGC TGCATCTGAT CGGCGAATGA
|
|---|
| Protein sequence | MRQAIHHLSV KARNRGLVEF TDEARRFVAA QGIETGLLTL FCRHTSASLL IQENADPSVQ
RDLERYFATL APEDAERYEH DAEGTDDMPA HLRTALTQVQ LSVPVEHGQM VLGTWQGLYL
FEHRRHTQQR DIVLHLIGE
|
|---|
| |