| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5231 |
|---|
| Symbol | |
|---|
| ID | 6280559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1408690 |
|---|
| End bp | 1409745 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642616317 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_001888960 |
|---|
| Protein GI | 187919929 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAA CCCATACGAG CTTTCAGCAA CTACCCGTCG TCGACGTGAG CGGCCTGTTC
AGCGATGACG ACGCCCAGCG GCTCGCCACC GCACGCGAAC TCGATCGCGC GGCACGCGAG
GCCGGCTTCT TCTATGTCAC CGGCCACCAG GTGTCACGCG CGCAACAAAG CGCGTTGATC
GAGCAGGCCA AACGCTTCTT CGCAGCCGAA CACGAATGGA AGATGCGCTA CTACATCGGC
AAGTCGACGG CGCATCGCGG CTACGTGCCC GAAGGCGAGG AAGTCTTCGC GGGCGGCAAG
CGCGACAGGA AGGAAGCCTT CGACACCGGC CGCGAACTGC CCGCCGACGA TCCCGACGTG
CGTGCCGGCA CGCCGATGCT CGGCCCGAAT AGCTGGCCGG AACAGGCGGG TTTTCGCGAA
GCGGTGGGCG GCTATTACAA AGCGGCGTTC GAACTCGGCC GCGCCCTGTT TCGAGGTTTC
TCGCTCGCGC TCGGCTTGCC TGAACAGCAC TTCGATCAGT ATCTACGCAA GCCGCCGAGC
CAGTTGCGTC TGATCCACTA TCCGCTCGAT CCGTCGGCGG AAGACCGGCC CGGCATCGGC
GCGCATACCG ACTACGAGTG CTTCACGATC CTGCTGCCGA CCGCGCCAGG ACTCGAAGTG
ATGAACGGCG AGGGCGAGTG GATCGATGCG CCGCCGGTCG AGAACGCATT CGTCGTGAAC
ATCGGCGACA TGCTGGAAGT GTGGACGGGC GGGACCTATG TCGCGACGTC GCATCGCGTG
CGCAAGGTGA GGGAGGAGCG CTACTCGTTT CCGCTCTTCT TTGCCTGCGA CTATCACACG
GTCGTTGCGC CGCTGCCGCA ATTCGCGACG CCCGAAGCGG TGGCGAAATA CCCGCCCGTA
TCGGCGGGCG ACCATCTGTT CGCGCAGACG GCGCAGAGCT TCACTTATCT GAAGGAACGT
CTTCAACGAG GAGAACTACT GTTGCCCGAT GGTTCGAAAG CGTTGGCAAG CTTCGGCCAA
CAGGCGCGCT ATGCGAGTGC GGAGATGGAC ACTTGA
|
|---|
| Protein sequence | MNPTHTSFQQ LPVVDVSGLF SDDDAQRLAT ARELDRAARE AGFFYVTGHQ VSRAQQSALI
EQAKRFFAAE HEWKMRYYIG KSTAHRGYVP EGEEVFAGGK RDRKEAFDTG RELPADDPDV
RAGTPMLGPN SWPEQAGFRE AVGGYYKAAF ELGRALFRGF SLALGLPEQH FDQYLRKPPS
QLRLIHYPLD PSAEDRPGIG AHTDYECFTI LLPTAPGLEV MNGEGEWIDA PPVENAFVVN
IGDMLEVWTG GTYVATSHRV RKVREERYSF PLFFACDYHT VVAPLPQFAT PEAVAKYPPV
SAGDHLFAQT AQSFTYLKER LQRGELLLPD GSKALASFGQ QARYASAEMD T
|
|---|
| |