Gene Bphyt_5114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5114 
Symbol 
ID6279281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1281453 
End bp1282562 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID642616204 
ProductS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 
Protein accessionYP_001888847 
Protein GI187919816 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC GTGCTGCAGT TGCGTTTGCA CCCGGCAAGC CCCTCGAGAT CGTCGAGATC 
GACGTCGAGC CGCCCCGCAA GGGCGAGGTG CTGGTCAAGA TCACGCATAC CGGCGTTTGT
CATACCGATG CCTTCACGCT CTCAGGCGAC GACCCCGAAG GCCTCTTCCC CGTCGTGCTC
GGCCACGAGG GCGCCGGGAT CGTCGTGGAA GTGGGTGAAG GCGTGACCAG CGTGAAACCC
GGCGATCACG TGATTCCGCT CTACACCGCC GAATGCGGCG AGTGTCTGTT CTGCAAGAGC
GGCAAGACCA ATCTGTGCGT GTCTGTGCGC GCGACCCAGG GCAAGGGCGT CATGCCCGAC
GGCACCAGCC GCTTCAGCTA CAACGGCCAG CCGCTCTACC ACTACATGGG CTGCTCCACG
TTCAGCGAGT ACACCGTCGT GGCCGAAGTG TCGCTCGCCA AGATCGACCC GCAAGCCAAT
CACGAGCAGG TGTGCCTGCT GGGCTGCGGC GTGACCACGG GCCTGGGCGC GGTGAAGAAC
ACTGCCAAGG TGCAGGAAGG CGATACCGTC GCCGTATTTG GCCTCGGCGG CATCGGTCTC
GCCGTGATCC AGGGCGCGAA GCTCGCCACG GCCGGCCGCA TCATCGCCGT CGACACCAAT
CCGGGCAAGT TCGATCTGGC GCGCGCCTTT GGCGCGACCG ACTGCGTGAA CCCCAAGGAC
CACGAGAAGC CCATTCAGCA AGTGATCGTC GACATGACGG GCTGGGGCGT GGACCACAGC
TTCGAATGCA TCGGCAGCGT CAACGTGATG CGCGCGGCGC TCGAATGCGC GCACCGTGGC
TGGGGTCAGT CGGTCGTCAT CGGCGTGGCC GGCGCCGGTC AGGAAATCTC CACGCGCCCG
TTCCAGCTCG TGACCGGCCG CCGCTGGCTG GGCACGGCCT TCGGCGGCGT GAAGGGCCGC
TCGCAATTAC CGGGCATGGT CGAAGACGCG ATGGAAGGCA AGATCCAGCT CGCGCCGTTC
GTCACCCACA CCAAGCCGCT CTCGGGCATC AACGAAGCCT TTGATTTGAT GCACGAGGGC
AAATCGATCC GCACCGTCGT TCACTACTGA
 
Protein sequence
MKSRAAVAFA PGKPLEIVEI DVEPPRKGEV LVKITHTGVC HTDAFTLSGD DPEGLFPVVL 
GHEGAGIVVE VGEGVTSVKP GDHVIPLYTA ECGECLFCKS GKTNLCVSVR ATQGKGVMPD
GTSRFSYNGQ PLYHYMGCST FSEYTVVAEV SLAKIDPQAN HEQVCLLGCG VTTGLGAVKN
TAKVQEGDTV AVFGLGGIGL AVIQGAKLAT AGRIIAVDTN PGKFDLARAF GATDCVNPKD
HEKPIQQVIV DMTGWGVDHS FECIGSVNVM RAALECAHRG WGQSVVIGVA GAGQEISTRP
FQLVTGRRWL GTAFGGVKGR SQLPGMVEDA MEGKIQLAPF VTHTKPLSGI NEAFDLMHEG
KSIRTVVHY