Gene Bphyt_5098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5098 
Symbol 
ID6280432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1262532 
End bp1264232 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content60% 
IMG OID642616188 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001888831 
Protein GI187919800 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.183916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTA CGAATTCGGA CACACTGGTT CATCGCTTTG TGCACTGGGA GCGTGTGCAG 
CCTGATACAC CGTACCTCAC CGAGTCGATG CCGGACGGAC AGGTCGTGGA GTACACCTGG
CAGGAGGTCG GCGATCAGGC CCGGCGCATG GCTGGCTATT TGCAGTCGTT GCAACTGCCG
CCGCGCAGTG CGATCTCGAT CGTCGGCAAA AATAGCGCCC ACTGGATCAT CGCGGATCTG
GCGATCTGGA TGGCCGGTCA CTTCTCGGTA CCGCTCTACA CAACCATCAA CGCGGACACT
GCGCAGTACA TCTTCGAGCA CTGCGACGTT CGTTTGCTGT TCGTCGGCAA GCTTGACGGC
AAGACTGACG GCTGGAATGA AATTCGCAAA GCAGTGCCGC CGCATGCGCG GTTGATCGGC
TTGCCCATGT CACCCGTGCC GGAGGCCCTC CAATGGGACG ATATCGTCGC GAGCCAGGCG
CCATTACGGG ACGTTCACCT GCCGGCTCCA GGCGAACTGG CTACGATCAT CTATACATCG
GGCACCACCG GCCGTCCCAA GGGCGTCCTG CACAGCTTCG GGACGATCTT TGCCTATGCG
GCGCAGGCAG GTGAATTCTG CGGCTTCACT CCGGCGGACC GCGTTCTGTC CTATCTGCCG
CTCGCACACA CGGCCGAGCG CTCCTTCGTC GAATCGAATT CGCTTTGCCA CGGTTTCCAG
GTTTTCTTCA ACGATAGTCT TGCTACTTTC GTTCAGGACT TGCATCGCGC GCGACCGACT
GTATTCATTT CGATGCCGCG ACTGTGGACC AAGTTCTATC AGGGCGTCTG CGCGAAACTT
CCCGCGAGCC AGCAAGCCTT GCTTGAGACG GCGAGCCCCG AAGCCGCGGT CATTAAACAG
CAGATCCTCA CGATGCTCGG GCTCGACGCG ACAAGAATCG CCTTTACCGG CTCGGCGCCG
CTGCCTGAGG AAATCACGAA CTGGTATCGC ATGCTCGGCC TCGAGTTACT GGACGTGTAC
GGCATGACGG AGAACTTCTC GTACTCGCAT TACAGCCGCC CAGGGCTCGT GCGGCCCGGC
TATTGCGGCC AGGCCATGCC GGGCGTCGAA TGCCGGATTG CCGGGAATGG CGAGATTCTG
CTCAAAGCGC CGACCATGAT GCTCGGCTAC TACAGGCAGC CGGACTTGAC CGCGCAAAGC
ATGACCGAGG ACGGCTTCTT CAAAACCGGC GATTGCGGCG AACTCGACGA ACTCGGCCGT
TTGAAAATCA CAGGGCGGGT GAAAGAAAAC TTCAAGACCA GCAAGGGAAA ATATGTGGCT
CCCGCGCCCA TCGAGAACAA GCTGAGTCAT GCAAAAGTTG AAGCCGTGTG CGCGACGGGG
CCGGGGCTCG CCCAGCCGTT CGCGCTGTTG ATGCTGTCGG CCGCCGCGCG CGGAGAACTC
CAGGGCACGC CTGCGTATGA TGCCTTGCGT GCCGAGCTGC GCGGCATGCT CGACAAGGTC
AACGACACGC TTGAAGATCA CGAGAAGCTC GCCTTCGCCG TGGTCGTCGC GGATGCCTGG
ACGTCCGACA ATGGCTTGCT CACGCCAACC ATGAAGATCA GGCGCGGCGC AATCGAGAAA
CGTTATCTGC CGATGGCCCA GGCGTGGGCT GAACTCGGAC AACCCGTCAT ATTCGAAACG
CAGTCCGTCA AGACGCAATG A
 
Protein sequence
MSGTNSDTLV HRFVHWERVQ PDTPYLTESM PDGQVVEYTW QEVGDQARRM AGYLQSLQLP 
PRSAISIVGK NSAHWIIADL AIWMAGHFSV PLYTTINADT AQYIFEHCDV RLLFVGKLDG
KTDGWNEIRK AVPPHARLIG LPMSPVPEAL QWDDIVASQA PLRDVHLPAP GELATIIYTS
GTTGRPKGVL HSFGTIFAYA AQAGEFCGFT PADRVLSYLP LAHTAERSFV ESNSLCHGFQ
VFFNDSLATF VQDLHRARPT VFISMPRLWT KFYQGVCAKL PASQQALLET ASPEAAVIKQ
QILTMLGLDA TRIAFTGSAP LPEEITNWYR MLGLELLDVY GMTENFSYSH YSRPGLVRPG
YCGQAMPGVE CRIAGNGEIL LKAPTMMLGY YRQPDLTAQS MTEDGFFKTG DCGELDELGR
LKITGRVKEN FKTSKGKYVA PAPIENKLSH AKVEAVCATG PGLAQPFALL MLSAAARGEL
QGTPAYDALR AELRGMLDKV NDTLEDHEKL AFAVVVADAW TSDNGLLTPT MKIRRGAIEK
RYLPMAQAWA ELGQPVIFET QSVKTQ