| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5064 |
|---|
| Symbol | |
|---|
| ID | 6279854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1223169 |
|---|
| End bp | 1224140 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642616155 |
|---|
| Product | Membrane dipeptidase |
|---|
| Protein accession | YP_001888798 |
|---|
| Protein GI | 187919767 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.723336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0155477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAT TGCACGACAA CAGCATCATC ATCGACGGTC TGAACATTTC GAAGTTCGAG
CGCTCGGTGT TCGAGGACAT GCGCAAGGGC GGCGTGACCG CCGTGAATTG CACGGTCTCG
GTCTGGGAAA GCTTCCAGAA GACCGTCGAT AACATCGCCG AAATGAAGCA GCAGATTCGC
GAGTACGGTG AGATTCTCAC GTTGGTGCGG ACCACGGACG ACATCTTCCG TGCGAAGAAA
GAGAACAAGA CAGGCATCAT TTTCGGTTTC CAGAACGCGC ACGCTTTCGA GGACAACCTC
GGCTATATCG AGGCGTTCAA GGACCTCGGC GTGAACGTGG TGCAGCTTTG CTACAACACG
CAGAACCTCG TGGGCACCGG TTGCTATGAA CGCGACGGCG GTCTGTCGGG CTATGGCCGC
GAAGTAATCC AGGAGATGAA CCGCGTCGGC ATCATGGTCG ATCTCTCGCA CGTGGGCGGC
AAGACGTCTT CTGAGGCGAT CGCGGCGTCG AACAAGCCGG TGTGCTACTC GCACTGCTGC
CCGTCGGGAC TGAAAGAGCA TCCGCGCAAC AAGAGCGACG AGCAACTGAA AGAGATCGCG
GACGCAGGCG GTTTCGTCGG CGTGACGATG TTCGCGCCGT TCCTCAAGCG CGGCGCGGAC
GCGACCGTCG AAGACTATAT CGAAGCGATC GAGTACGTGG TCAATCTGAT CGGTGAAGAT
CAGGTCGGCA TCGGCACCGA TTTCACGCAA GGCTACAGCA CCGAGTTCTT CGACTGGATC
ACGCACGACA AGGGCCGTTA TCGTCAATTG ACGAACTTCG GCAAGGTGGT GAATCCCGAA
GGCATTCGCA CGATCGGCGA GTTTCCGAAT CTGACGGCCG CCATGGAGCG CGCCGGCTGG
AGCGAGACGC GCATCAAGAA GATCATGGGT GAAAACTGGG TGCGGGTGTT CGGCGAAGTC
TGGAAGGTTT GA
|
|---|
| Protein sequence | MSTLHDNSII IDGLNISKFE RSVFEDMRKG GVTAVNCTVS VWESFQKTVD NIAEMKQQIR
EYGEILTLVR TTDDIFRAKK ENKTGIIFGF QNAHAFEDNL GYIEAFKDLG VNVVQLCYNT
QNLVGTGCYE RDGGLSGYGR EVIQEMNRVG IMVDLSHVGG KTSSEAIAAS NKPVCYSHCC
PSGLKEHPRN KSDEQLKEIA DAGGFVGVTM FAPFLKRGAD ATVEDYIEAI EYVVNLIGED
QVGIGTDFTQ GYSTEFFDWI THDKGRYRQL TNFGKVVNPE GIRTIGEFPN LTAAMERAGW
SETRIKKIMG ENWVRVFGEV WKV
|
|---|
| |