| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5047 |
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| Symbol | |
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| ID | 6279494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1203567 |
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| End bp | 1204961 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616138 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001888781 |
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| Protein GI | 187919750 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.533739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.269496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCA GCGTCTTCGA TCTGTTCAAG ATCGGTATCG GTCCGTCAAG CTCGCACACC
GTGGGGCCGA TGATCGCTGC ATGCCGCTTC GCTTCGCATA TCGAAGACGC CAATCTGCTC
GGCTTCGTGC GCGGCGTGAA GGTCGACCTG TTCGGCTCGC TCGGCGCGAC CGGCAAGGGG
CACGGCACGG ACAAAGCGGT GCTGTTGGGA CTCGAAGGCA ATCTGCCCGA TTCCATCGAC
CCGGACCTGA TCGAGCCGCG CCTGCAAGCG ATCCGCGTGA CAAAACAGCT GGTGCTGCTC
GGCAAGCACC CGGTCAAATT CGACGAGCGC GAGCATCTGG GCTTTTTCCG CAAGCTGATG
CCGGGTGCGC CGGGTTCGGG CATCGTGCAT CCGAATGGCA TGCGCTTTCA GGCTTTCGAC
GAAAACGGCC AACTGCTGGT GGAGAAAGAG TATTACTCGG TCGGCGGCGG CTTCGTGGTG
AACCGCGAAG GCGATCGCGT GAACGGCGTG CGCGCCGGCG CCGAAGTGCC ATATCCGTTT
CGTACCGGCG ACGATCTGAT GCGCGTGTGC CGTGAGACCG GATTGTCGAT CGCGCAGATC
ACGTTGCGCA ACGAATGCGC GGCGCGCCCC GAACAGGAAG TGCGCGAAGG TTTGCTGGCG
ATCTGGCGCA CCATGTCCGC GTGCGTCGAA CGCGGCTGCA AGGTGCGCGG CGAGTTGCCC
GGTCCGATGC ACGTGAAGCG CCGCGCCGCC GATCTGTGCG GACAATTGCG TTCGCGCTCG
GAAGAGTCGC TGCGCGATCC GCTCTCCATG CTCGACTGGG TCAACCTCTA CGCGATGGCC
GTCAACGAAG AAAACGCGGC GGGCGGCCGC GTCGTCACGG CGCCGACCAA CGGTGCGGCC
GGCGTGATTC CCGCGGTGCT GCACTACTAC GTGAAGTTCA TGCACGCGTC GAACGACGAG
GGCATCGTCA ACTTCCTGCT GACGGCGGCG GCGATCGGCA TCATCTACAA AGAGACGGCG
TCGATCTCGG GCGCCGAAGT GGGCTGCCAG GGCGAAGTGG GCGTGGCCTG CTCGATGGCC
GCCGCGGCGC TCGCCGCCGT GATGGGCGGC ACGCCGACGC AAGTCGAAAA CGCCGCCGAA
ATCGGCATGG AACACAACCT CGGCATGACC TGCGATCCGG TCGGCGGCCT CGTGCAGATT
CCGTGCATCG AACGCAACGC AATGGGCGCG ATCAAGGCAC TGAACGCCGC GCGCATGGCG
ATGAAGGGTG ACGGCCAGCA TTACGTGTCG CTCGACAATG TGATCAAAAC CATGCGCGAA
ACCGGCGCGG ACATGAAGAC GAAATACAAG GAGACGTCGC GCGGCGGATT GGCCGTCAAC
GTCATCGAGT GTTGA
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| Protein sequence | MNVSVFDLFK IGIGPSSSHT VGPMIAACRF ASHIEDANLL GFVRGVKVDL FGSLGATGKG
HGTDKAVLLG LEGNLPDSID PDLIEPRLQA IRVTKQLVLL GKHPVKFDER EHLGFFRKLM
PGAPGSGIVH PNGMRFQAFD ENGQLLVEKE YYSVGGGFVV NREGDRVNGV RAGAEVPYPF
RTGDDLMRVC RETGLSIAQI TLRNECAARP EQEVREGLLA IWRTMSACVE RGCKVRGELP
GPMHVKRRAA DLCGQLRSRS EESLRDPLSM LDWVNLYAMA VNEENAAGGR VVTAPTNGAA
GVIPAVLHYY VKFMHASNDE GIVNFLLTAA AIGIIYKETA SISGAEVGCQ GEVGVACSMA
AAALAAVMGG TPTQVENAAE IGMEHNLGMT CDPVGGLVQI PCIERNAMGA IKALNAARMA
MKGDGQHYVS LDNVIKTMRE TGADMKTKYK ETSRGGLAVN VIEC
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