| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5036 |
|---|
| Symbol | |
|---|
| ID | 6279189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1188875 |
|---|
| End bp | 1189786 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642616127 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001888770 |
|---|
| Protein GI | 187919739 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.291853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.617167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGT CGATCCAGCC GGACGATCTC GCTTTTTTCT CCACACTCGC CGCGAGCGGC
AGCCTCACGG CGGCCGCACG CGAACTCGGG CTGAGCACGG CGGCCGTGAG CAAGCATCTG
GCGCAGATGG AATCGCGGGC GGCCGTCTCG CTCGTCAACC GCACGACGCG GCGCATGAGC
CTCACGCCGG AGGGCGAGCT GTATCTGACG CGCGCGCGGC GCATTCTGAG CGAGATGGAC
GACCTCGCCC AATTGCTCGG CGGTTCGCAG GCGGCACCGA AAGGCCTGCT GCGCGTGAAC
GCGACGCTCG GATTCGGCCG CAGCCACGTG GCTCCGCTGA TCTCGCGGTT CGTGCGGCGC
TTTCCCGAGG TGGATGTGCA GTTGCAGCTT TCGGTCGATC CGCCGCCGCT CAGCGACGAC
GCCTTCGACG TCTGCGTGCG TTTCGGCGAA CCGCCGGATG CCCGAGTGAT CGCGCGCCGG
GTCGCGTCGA ACCGGCGCCT GTTGTGCGCC TCGCCGCGCT ATCTTGCCGA GCGGCGCGCG
CCGCGCAGTC CGGCGGAACT GGCGCAGCAC AATTGCATCG GCATTCGCCA GGGCGGCGAC
GCTTACGGCG TCTGGCGTCT GACCAGCGGA CGCGGCGCCG CGGAAAAAAC CGAGACAGTG
CGCGTGCGCG GCAACCTGAC CACCAACGAC GGCGAAATCG CGGTGAAGTG GGCGCTGGAC
GGCCAAGGCA TTCTGATGCG CGCCGAATGG GATATCGCGG AATATCTCGC CGATGGCCGG
CTCGTGCACG TCCTGCCCGA GTACCGCACG CCGGGCGCGG ATATCTATGC AGTGTACCCG
CAGCAGTTAC AGATGACGGC GCGGGTCAAG GCGTTCGTCG ACATGCTGGT CGAGACGCTC
GGCGTGCGTT GA
|
|---|
| Protein sequence | MTSSIQPDDL AFFSTLAASG SLTAAARELG LSTAAVSKHL AQMESRAAVS LVNRTTRRMS
LTPEGELYLT RARRILSEMD DLAQLLGGSQ AAPKGLLRVN ATLGFGRSHV APLISRFVRR
FPEVDVQLQL SVDPPPLSDD AFDVCVRFGE PPDARVIARR VASNRRLLCA SPRYLAERRA
PRSPAELAQH NCIGIRQGGD AYGVWRLTSG RGAAEKTETV RVRGNLTTND GEIAVKWALD
GQGILMRAEW DIAEYLADGR LVHVLPEYRT PGADIYAVYP QQLQMTARVK AFVDMLVETL
GVR
|
|---|
| |