Gene Bphyt_5030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5030 
Symbol 
ID6278087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1182248 
End bp1182817 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content64% 
IMG OID642616121 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001888764 
Protein GI187919733 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.938239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.565327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT CCGCTGCCAT CGATCTGACC CAGGCGATCT CCTTGCGCGT GAAGACCGAG 
CGCGAGGCGC GCAACTGGTC GCTGAGCGAA CTGGCGGAGC GCTCGGGCGT GTCGAAGGCG
ATGATCAGCA AGATCGAACG AGGCGAGGCG AGCCCTACGG CGACGGTGCT CGGGCGTCTG
TCTGGCGCGT TCGGCCTGAC CTTGTCGACC TTGCTGGCGC TCGCCGAGCA GACTGGCGAA
CGGCTCGTGC GGCATGCGGA CCAGTTAGTC TGGCAAGACC CGGAAACCGG CTACACGCGC
CGGCGCATCT CGCCGCCCAC GGGCGGTGTG CTGGAATTGC TGGAGATAGA ACTGCCGCCG
GGCGTGAAAG TACCGTACCC GCCGGATGCT TTCGTGTTCC AGCATCAACA GATCTGGGTG
ACGCTCGGGG TGTTGACCTT CCGGGAGGGC AAGCAGGTTT ATCGGCTGGA AGCGGGGGAT
TGTCTGCAAC TCGGGGCGCC GCTCGAATGC GAATTCTTCA ACGTGGGCAA AGACGTGTGC
CGTTACGTGG TCGGCCTCGT CCGACGATAG
 
Protein sequence
MSESAAIDLT QAISLRVKTE REARNWSLSE LAERSGVSKA MISKIERGEA SPTATVLGRL 
SGAFGLTLST LLALAEQTGE RLVRHADQLV WQDPETGYTR RRISPPTGGV LELLEIELPP
GVKVPYPPDA FVFQHQQIWV TLGVLTFREG KQVYRLEAGD CLQLGAPLEC EFFNVGKDVC
RYVVGLVRR