| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5006 |
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| Symbol | |
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| ID | 6278469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1155924 |
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| End bp | 1158497 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616097 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_001888740 |
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| Protein GI | 187919709 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.624438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0207603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCG CTGATTCTCG TCATCTACCG CGCTTGCGAG GCCATCGTGC TCTCGCGCGC
TGGCTGCTCG GCGCCGAATG GCGCAGTCAT CGCGGGCGCG CTCTGGTTGC GATTGCTACG
ATCGCGCTCG GCGTCGCGCT CGGTTACGCC GTGCAGTTGA TCAACAGCGC GGCCTTCAAT
GAATTCTCCG CGGCGGCCCG CAGCCTGTCG GGCGAAGCCG ATCTGCAGGT GCGCGGCGCC
CAACCATTAG TCGACGAAGC CATCTATCCG CTGCTCGCCA ACGCGCCCGG AGTCGCGCTG
GCCAGTCCCG TGCTTGCACT CGATGTCACC GTGCCCGACC GGAGCGCCGC ACTGCCGGTG
CTCGGCATCG ACGTTTTCAA AGCGGGCCGT ATTGCGCCCG ATCTGATCGG CGTGCCGTCG
CCGGATAAAC CGTTCGACAG CCTCGCGACC GACACCGTAT TTCTCTCGAC AGCAGCCCAG
CAATGGCTGA AGGTGAAAGC AGGCGACGAG GTGGCGCTGC GAAGCGGCAC CTCGATCGTG
CATTTGCGCG TGGCGGGCGG CATCGTGAGA ACACGGCCGG GCCAGCGGCT CGCCGTCATG
GATATCGCCG CCGCGCAGTG GAAATTCGGC AAATTGGGCA AGCTGTCGCG AGTCGACGTG
CAACTCGAAC GCGGCGTCGA CCGCGAGCGC TTCAGACGTG AACTGCAAGC GCGACTCGGC
AACCAGTGGG TCATTGCCGA AACGCGTGAC GCCGAAAGCC GCACCGATCG CCTTTCACGG
GCGTATCGGA TCAATATGAA CGTGCTCGCG CTGGTGGCCT TGTTCACGGG CGCATTTCTG
GTGTTTTCGA CGCAGGCGCT GAGCGTCGTG CGACGCCGCG CGCAATTCGC CATGCTGCGT
GTGCTCGGGT TGACGCGCGG CCAACTGCTG CGCCAGATCC TGGTGGAAGG CGCGCTGCTC
GGTCTGCTGG GCTCGCTCGC GGGGCTCGCG CTCGGCTACG CGATGGCGAG CAGCGCGCTG
CATTTTTTCG GCAGCGATCT GGGCGGCGGC TACTTTCCTG GTGTGCAGCC GCGAGTCGGC
TTCGAACCGC TGGCGAGCGC GTTGTTTCTG ATGCTCGGGC TGGCCGTATC GGTGTTGGGC
AGTCTCGCCC CCGCGCTGGA AGCGGCGCGT GCGCGGCCGG CCACAGCGCT CAAGGCGGGC
GCCGAAGAAG GCGCGTTGGC GCGGCTCGCC ACACCGTGGC CCGCCCTGCT GTGTCTGCTG
GCCGCCGCAG CGCTCACCCA GTTGCCGCCG CTCTTCGATG CGCCGATCGG CGGCTATCTG
GCCGTCGCAT TGCTGCTGGT CGGCGGAATT GCGCTGATGC CGCGCGTGAC CGCGCTCATC
TTCGGCGCGG CGAGCCGTGC TTTCGCCACG CGACGCCGGA CCGGCGCGGC CGGCACGCTG
GCGCTCGCGC GTCTCGCGAA TGCGCCTGGG CACGCGTCGA TCGCCATGGG CGGTGTGCTG
TCGAGCTTTG CGCTGATCGT CGCGATGGCC ATTATGGTCG CCAGCTTCCG GGTTTCCGTC
GAAGACTGGC TGGTTCATCT GCTCTCCGCC GATCTCTATG TCCGCGTGGC GCCGAACGGC
GACACCGGCG GTTTGCGGTT GGACGAACAG AGCCGGCTCG CGGCCGTTCC CGGTATTAAA
ACAGCCGCAT TCGCCCGCAC TTCGCATCTG ACGCTCGACC CTGCGCGGCC CGACATCGCG
CTGCTCGCGC GCGAGATCGA CGCAGCCGAT CCGGGCGCGA ATCTGCAGAT AACTGGAGCT
GTGCTGCCGC CTGCGGAACT TCACGCCGGC GAAACGCCTG TTTGGGTATC CGAAGCAATG
GTCGACCTGT ATCAATACAA GCTGGGTCAG CGAGTTCGAT TGCCGTTCGG CGAGCGCGGC
CATGTGTTCG TGGTGGCGGG CGTATGGCGC GATTACGTGC GGCAGACCGG AGCCATTCAG
ATACGGCTTG CCGATTTCCG GCGCTTGACC GGTGACACGA GTGCAACCGA TGTCGCCGTC
ACCGTTCAGC CGGGAACGAG TGTCGATCAG GTGGTCGAGG GGCTGCGCGC ACTGCCCTTC
GGCGCATCGC TGGATTTGTC GCTACCTGGT GAAATCCGCG CGCGCACGCT GGTGATTTTC
GATCGCAGTT TTGCGGTCAC CTATCTTCTC GAAGCGGTCG CTATCGTGAT CGGCCTGTTC
GGCGTGGCAG CCACGTTCTC CGCGCAGACG CTCGCTCGGT CGCGTGAGTT CGGCATGCTG
CGGCACGTCG GCGTGACGCG CTCGCAGGTG CTCGCCATTC TCGCGCTCGA AGGCGGCATG
CTCACCGCGT GCGGCATCGC ACTGGGCTTC GTGCTCGGCT CTGCGATCAG TCTGATTCTG
GTGTTCGTCG TCAATCCGCA GTCGTTTCAT TGGAGCATGT CACTGCATGT GCCGTGGATC
GCGCTTGCTA CCGTCGCGGT GGTGATGCTC GCTTCGTCGT GTTCGACAGC AGTGATCGCG
GGACGCGACG CAGTATCGGT GGATGCTGTG CGTGCCGTGA AGGAGGATTG GTGA
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| Protein sequence | MTSADSRHLP RLRGHRALAR WLLGAEWRSH RGRALVAIAT IALGVALGYA VQLINSAAFN
EFSAAARSLS GEADLQVRGA QPLVDEAIYP LLANAPGVAL ASPVLALDVT VPDRSAALPV
LGIDVFKAGR IAPDLIGVPS PDKPFDSLAT DTVFLSTAAQ QWLKVKAGDE VALRSGTSIV
HLRVAGGIVR TRPGQRLAVM DIAAAQWKFG KLGKLSRVDV QLERGVDRER FRRELQARLG
NQWVIAETRD AESRTDRLSR AYRINMNVLA LVALFTGAFL VFSTQALSVV RRRAQFAMLR
VLGLTRGQLL RQILVEGALL GLLGSLAGLA LGYAMASSAL HFFGSDLGGG YFPGVQPRVG
FEPLASALFL MLGLAVSVLG SLAPALEAAR ARPATALKAG AEEGALARLA TPWPALLCLL
AAAALTQLPP LFDAPIGGYL AVALLLVGGI ALMPRVTALI FGAASRAFAT RRRTGAAGTL
ALARLANAPG HASIAMGGVL SSFALIVAMA IMVASFRVSV EDWLVHLLSA DLYVRVAPNG
DTGGLRLDEQ SRLAAVPGIK TAAFARTSHL TLDPARPDIA LLAREIDAAD PGANLQITGA
VLPPAELHAG ETPVWVSEAM VDLYQYKLGQ RVRLPFGERG HVFVVAGVWR DYVRQTGAIQ
IRLADFRRLT GDTSATDVAV TVQPGTSVDQ VVEGLRALPF GASLDLSLPG EIRARTLVIF
DRSFAVTYLL EAVAIVIGLF GVAATFSAQT LARSREFGML RHVGVTRSQV LAILALEGGM
LTACGIALGF VLGSAISLIL VFVVNPQSFH WSMSLHVPWI ALATVAVVML ASSCSTAVIA
GRDAVSVDAV RAVKEDW
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