| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4974 |
|---|
| Symbol | |
|---|
| ID | 6277668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1111881 |
|---|
| End bp | 1112324 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642616060 |
|---|
| Product | putative signal-transduction protein with CBS domains |
|---|
| Protein accession | YP_001888708 |
|---|
| Protein GI | 187919677 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0816417 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCG TTGCACAGCT TCTTAAAACG AAACCGAACA ACACCACCGT TTTTACTGTC
GGGGCCGACG ACTCAGTCTA TGAGGCAATC AAGCTGATGG CCGAAAAAGG CATCGGCGCG
CTGGTCGTGA CAGACGGCGA CAGCATCGCC GGCATCGTCA CGGAGCGCGA CTACGCGCGC
AAGGTCGTGC TGATGGACCG TTCGTCGAAG GCCACGCCGG TGCGCGACAT CATGAGCAAG
GCGGTGCGCT TCGTGCGCCC CGATCAGACC ACCGACGACT GCATGGCCCT CATGACGGAG
CGGCGTATGC GCCACTTGCC GGTGATCGAG AATGACCGGC TGGTCGGCAT GGTATCGATC
GGCGACCTGG TGAAGAACAT CATCGCCGAA CAGCAGTTCA CCATTCAGCA ACTCGAGTTC
TATATTCACG GCGAGCGGCC CTGA
|
|---|
| Protein sequence | MTSVAQLLKT KPNNTTVFTV GADDSVYEAI KLMAEKGIGA LVVTDGDSIA GIVTERDYAR
KVVLMDRSSK ATPVRDIMSK AVRFVRPDQT TDDCMALMTE RRMRHLPVIE NDRLVGMVSI
GDLVKNIIAE QQFTIQQLEF YIHGERP
|
|---|
| |