| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4965 |
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| Symbol | |
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| ID | 6280180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1102382 |
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| End bp | 1103455 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616051 |
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| Product | ABC transporter related |
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| Protein accession | YP_001888699 |
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| Protein GI | 187919668 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0950419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.125498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATT TAACGTTGCA GGCCGTGACC CGGCGTTTCG GCGCGGCGCA TGCCGTGGAC
AACGTCGATC TGAGCGTGCC CGACGGCAAG CTGGTGTGCT TCCTCGGCCC GTCCGGCTGC
GGCAAGACCA CGCTGCTGCG CATGATCGCC GGGCTGGAAA CGCCGACCTC GGGCAGCATC
CACTTCGCCG GGCGCGACAT CACGCGCCTG CCGGCCAATC AGCGCGACTT CGGCATGGTG
TTTCAGTCGC TCGCTCTGTT TCCGCACATG ACGGTCGCGC AGAACATCGC GTATCCGCTG
AAGCTGCGCA AAACCGCGAA GGATCAGCAG ACGCGCCGCG TGGCCGAATT GCTGGAACTG
ATCCAGTTGC CGCACATGGC GAACCGGCCG GTCACGCAAC TCTCCGGCGG CCAGCGCCAG
CGCGTGGCGA TTGCGCGCGC GATCGCGTCG CAACCAAAAC TGCTGCTGCT CGACGAGCCG
CTCTCCGCGC TCGACGCCAA GCTGCGCGAA GCCATGCAAG TGGAAATCCG CCTGCTGCAG
CAGCGCCTCG GCATCACCAC GATCATGGTC ACGCACGACC AGCGCGAAGC GATGACGATG
GCCGACGAAA TCGTCGTGAT GGAGAAAGGC CGCATCGCGC AGGTCGGCAA GCCGCTCGAT
ATCTATCGCG ATCCGGTCAG CGAGTTCGTC GCCGACTTTA TCGGCCTCGG CAATATCCTG
CCGGTCACCT ACGACGGCGC GGGCGGCGTG AGCCTGCCGG GTGGCCGGCG CATCAGCGTC
GTGCAGCCGG CGCGCGTGCC GGAGTCGAGC AGCGATATCC GCCTGTTGAT CCGGCCGGAA
GACGTGTGCG TGAAAGCGGC GTCCGACGCG GCGGGCCCGA ACCGGCTGCT GGGCACCGTG
ACGTTTATCC GCGACGTGGG CGCGTCGCTC GAAGCGACCA TCGATTGCGC CGGTTTCACG
TTGACCGCCG CCACCACGCC GCGCGAAACG CCGGGGCTTG CGCTCGGCAT GCCGGTGCTC
GCGGAATTGC CACCGCACGC GTGCAAACTG ATCGCCGCGC GCGCCGCGCA TTGA
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| Protein sequence | MTHLTLQAVT RRFGAAHAVD NVDLSVPDGK LVCFLGPSGC GKTTLLRMIA GLETPTSGSI
HFAGRDITRL PANQRDFGMV FQSLALFPHM TVAQNIAYPL KLRKTAKDQQ TRRVAELLEL
IQLPHMANRP VTQLSGGQRQ RVAIARAIAS QPKLLLLDEP LSALDAKLRE AMQVEIRLLQ
QRLGITTIMV THDQREAMTM ADEIVVMEKG RIAQVGKPLD IYRDPVSEFV ADFIGLGNIL
PVTYDGAGGV SLPGGRRISV VQPARVPESS SDIRLLIRPE DVCVKAASDA AGPNRLLGTV
TFIRDVGASL EATIDCAGFT LTAATTPRET PGLALGMPVL AELPPHACKL IAARAAH
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