| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4960 |
|---|
| Symbol | |
|---|
| ID | 6280331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1096405 |
|---|
| End bp | 1098657 |
|---|
| Gene Length | 2253 bp |
|---|
| Protein Length | 750 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642616046 |
|---|
| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
|---|
| Protein accession | YP_001888694 |
|---|
| Protein GI | 187919663 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.822901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0923182 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGG GATTGCTCGA CTCACAAAAC GGCACGCAAG CGTCGAAGGC CGGCGCGCGC
GCCGCAGGTG GTTTGTCGCG CCGCACCTTT CTGAAATTCG GCGTGACGGT CGGCGCGGCG
GCGGGCGGCG GTCTGTTGCT CGGCTTCAGC ATGCCGGCCG CCAGTCAGGA TCAGAAGGCC
GGCAAGTCGG TGATCGGCGG CGACGGTGTC GAAGCACCGC AAAGCGGCGT GTTCGCGCCG
AACGCGTTCA TTCAGATCGA TACCGCAGGC AAGGTCACGC TCGTGATCCC GAAGGTCGAG
ATGGGCCAAG GCGTCTACAC GTCGATTCCG ATGCTGATCG CCGAAGAACT CGAAGTGCCG
CTCGACTCAA TCACCATCGA TCACGCGCCG CCGAACGAGA AGCTCTTCAT GGACCCGCTG
CTCGGCGGCC AGCTCACGGG CGGCTCGACC TCGATCCGCT ATGCGTGGGA GCCGATGCGC
AAAGCGGGCG CCACCGCGCG CACCGTGCTG ATCAGCGCGG CGGCGCAGCA ATGGCAGGTC
GATCCCGCAA GCTGCCACGC GCAGGGCGGA CAGGTGATTC ACGAGGCTAG CAAGCGCAGT
GTCAGCTATG GTGAACTGGT GACCGCTGCC GCCGGTCTCC CCGCGCCGCA GAACGTCAAA
CTGAAGGACC CGAAAGACTT CAAGCTGATC GGCACGGCGG TCAAACGGCT CGACTCGCCG
GAGAAAGTGG ACGGCACCGC AATGTTCGGG CTCGACGTGC GCGTGCCCGA CATGGTCTAC
GCGGCGATCG CCAACTGCCC AGTGTTCGGC GGCACGCTCG CGAGCGTCGA CGACACCAAC
GCGAAGAAAA TCCCCGGCGT GCGCCAGGTC ATCAAGATCG ACAACGCGGT CGCGGTGATC
GGCGACCACA CGTGGGCCGC CAAACGCGGC GTGCAGGCGC TCGTCATCAA GTGGAACGAA
GGCGCGGGCG CGAACCTGTC GATGAAGCAG ATCGTCGACG ATCTCGCCAA TGCCTCGCAA
CGCGACGGCG CGGTGGCGCG CAAGGACGGC GACGTCGGCA ATGCGTTCTC CAATGCGAAG
ACGCGCGTCG ACGCCGTGTA TCAGCAGCCG TTTCTCGCGC ACGCCACCAT GGAGCCGATC
AACTGCACGG TGCATGTGCG CCCCGACGGT TGCGATGTCT GGCTCGGCTC GCAGGTGCCG
ACGCGCGTGG TGGATGCCGC CGCGGCGGTC ACGGGTTTGC CCGCCGACAA GATCGTCGTG
CACAACCATC TGATCGGCGG CGGCTTCGGC CGGCGGCTCG AGTTCGACAT GGTCACGCAA
GCTGTCAAGG TGGCCAAGCA GGTGTCGACG CCGGTGAAGG TGGTCTGGAC CCGCGAAGAA
GACATTCAGC ACGACATGTA CCGCCCGTAT TACTACGACA AGATTTCGGC CGGGCTCGAT
GCGAACGGCA AACCGGTCGC GTGGCAGCAT CGGATCGTCG GTTCGTCGGT AATGGCGCGG
TTCGCGCCGC CTGCGTTCAA GAACGGCATC GATCCGGACG CGGTCGAGGT CGCGGCGGAC
TTGCCGTACG ACCTGCCGAA CCAGTTGATC GACTACGTTC GCCAGGAACC GCACACGGTG
CCCACCGCAT TCTGGCGCGG CGTGGGACCG ACGCGCGGCA CCTTCGTGGT GGAGAGTTTC
ATCGACGAAC TCGCGGCGCA GGCCAAAGTC GATCCTGTCA AATATCGTCA GGACCTGCTC
GGCAAAACTC CGCGCGCGCT GAGCGTGCTC AACGTCGCCA CGCAAGCGGC GAACTGGGGC
AGCGCGGTGC CCAAGGGCCA GGGGCGCGGT GTGTCGGTCA TGCATGCGTT CGGCAGCTTC
TTCGCGATCG TCGTCGATGT GGCGGTGGAG CAGGGCGAGG TGGCGGTCAA GCGCGTGGTC
TGCGCGGTGG ATTGCGGCAT GGTGGTCAAC CCGAACACGA TCGAAGCGCA AGTGCAGGGC
GGCATCATCT TCGGCATCAC GGCGGCGCTC TACGGCGAGA TCACGATCAA GGACGGCCGC
GTCGAGCAGA ACAACTTCAC CGATTACCGG ATGCTGCGGA TCGATCAGAC GCCGCCTATC
GAGGTGCATA TCGTGAAGAG TAGCGAGGCG CCCGGCGGCA TCGGCGAACC CGGTACCGCG
GCGCTCGCGC CCGCGCTGAC CAACGCGATT TACGCGGCCA CCGGCAAGCG GCTGCGGCAA
TTGCCGGTCG GCAGCCAACT GCAAACCGTC TGA
|
|---|
| Protein sequence | MSQGLLDSQN GTQASKAGAR AAGGLSRRTF LKFGVTVGAA AGGGLLLGFS MPAASQDQKA
GKSVIGGDGV EAPQSGVFAP NAFIQIDTAG KVTLVIPKVE MGQGVYTSIP MLIAEELEVP
LDSITIDHAP PNEKLFMDPL LGGQLTGGST SIRYAWEPMR KAGATARTVL ISAAAQQWQV
DPASCHAQGG QVIHEASKRS VSYGELVTAA AGLPAPQNVK LKDPKDFKLI GTAVKRLDSP
EKVDGTAMFG LDVRVPDMVY AAIANCPVFG GTLASVDDTN AKKIPGVRQV IKIDNAVAVI
GDHTWAAKRG VQALVIKWNE GAGANLSMKQ IVDDLANASQ RDGAVARKDG DVGNAFSNAK
TRVDAVYQQP FLAHATMEPI NCTVHVRPDG CDVWLGSQVP TRVVDAAAAV TGLPADKIVV
HNHLIGGGFG RRLEFDMVTQ AVKVAKQVST PVKVVWTREE DIQHDMYRPY YYDKISAGLD
ANGKPVAWQH RIVGSSVMAR FAPPAFKNGI DPDAVEVAAD LPYDLPNQLI DYVRQEPHTV
PTAFWRGVGP TRGTFVVESF IDELAAQAKV DPVKYRQDLL GKTPRALSVL NVATQAANWG
SAVPKGQGRG VSVMHAFGSF FAIVVDVAVE QGEVAVKRVV CAVDCGMVVN PNTIEAQVQG
GIIFGITAAL YGEITIKDGR VEQNNFTDYR MLRIDQTPPI EVHIVKSSEA PGGIGEPGTA
ALAPALTNAI YAATGKRLRQ LPVGSQLQTV
|
|---|
| |