Gene Bphyt_4957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4957 
Symbol 
ID6278209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1093795 
End bp1094613 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content63% 
IMG OID642616043 
Productalpha/beta hydrolase fold 
Protein accessionYP_001888691 
Protein GI187919660 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.174321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0565751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCT GGCCGCTCCC CGAAAGCTAT ACCTTCCGCG ATCAAGCCGT GCGTTTCAAC 
GTGAGCGGCA ATGGTCCGCC ACTGGTGCTG GTGCACGGCA CGCCGTTCTC TTCGTATGTG
TGGCATCGCA TCGCTCCGCA TCTCGCCCAG ACGCGCACGG TCTATTACTA CGACCTGCTC
GGCTACGGGC AATCCGAACA GCGCGACGGC CAGGACGTTT CGCTCGGCGT GCAGAATGCT
TTGCTGGCGG AATTGCTCGC GCATTGGCAA CTGACAAGCC CGGATGTCAT CGCACATGAT
TTCGGCGGCG CGACTTCATT GCGCGCGCAT CTGATCGATG GCTGCGACTA TCGAAGCCTC
ACGCTGATCG ATCCGGTCGC GGTCGCGCCA TGGGGTTCGC CGTTCGTGCG GCATGTGCGC
GAACACGGCG ACGCGTTCGC CGGACTGCCG CCGTATATCC ACGAAGCGGT GGTGAAAGCG
TACGTGCGCG GCGCGATAGC GCGCGAGATT CCGGACGACG AACTCGCGCC TTATGTCACG
CCATGGCTCG GCGCAACCGG CCAGGCGGCG TTCTACCGGC AGATCGCGCA AATGGATCAG
CGCTACACCG ACGAGGTCGA AGCGCGCTAT CCGCAGTTAC GCTGTCCGGT GCAGATCTTG
TGGGGTGAAG AGGACCAGTG GATTCCTTTG GCGCGCGGCC GACAACTGGC CGCGGCCATA
CCGGAAGCGC GCTTTCAGGC GGTGCCGAAA GCCGGCCACC TGATGCAGGA AGATGCGCCG
GAAGCGATCG TCGCCGCGGC ACTGCTTTGG CTGGATTGA
 
Protein sequence
MQTWPLPESY TFRDQAVRFN VSGNGPPLVL VHGTPFSSYV WHRIAPHLAQ TRTVYYYDLL 
GYGQSEQRDG QDVSLGVQNA LLAELLAHWQ LTSPDVIAHD FGGATSLRAH LIDGCDYRSL
TLIDPVAVAP WGSPFVRHVR EHGDAFAGLP PYIHEAVVKA YVRGAIAREI PDDELAPYVT
PWLGATGQAA FYRQIAQMDQ RYTDEVEARY PQLRCPVQIL WGEEDQWIPL ARGRQLAAAI
PEARFQAVPK AGHLMQEDAP EAIVAAALLW LD