Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4921 |
Symbol | |
ID | 6277878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1048325 |
End bp | 1049287 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616007 |
Product | OmpA/MotB domain protein |
Protein accession | YP_001888655 |
Protein GI | 187919624 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.730269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0282337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACC ACACATCCAC CGCACGCATG ACGGTGCTGC TCGCGGGTCT TCTGCTCGGC GCGTTTGCGC ATGCCGACAA CGACGGGCCC GCTCGCGTTA CGCCGGTCGA CAATAGCGGC GTTTCGATTC ACACCACGGT GCTGCCGCCG GCTGCTTCGG CCTCCGTTGG CAACGCAGGG CCTGCCGTGA ATACGGCCGG ACTCGCAAGC GGCACGACCG GCGCCGGCAC CGGCGCGATC ACCGCGGCGC CGCCGCCTGC CAACGCGACG CCGGGCCAGG TCGTGGTGGG CGGCAAAGTG CCGGACGAAG CGACCAAGGC GGCCGTGCTC GCGCGCCTGC GCGACACTTA CGGCGCGGCC AATGTGGTCG ATCAGATCGA AGTCGCCGAC GTGGCCACGC CGCCGAACTG GTCCGCCAAT GTGCAGAAGC TGATCGGCCC GCAGTTGAAG CAGATCAGCA AAGGCCAATT GAAAATAGAC GGCACGCAGA TCGACGTGAA AGGCGAAGTG CATAACGAGT CGCAGCGGCA GCAACTCGCA AGCGATATGG CGAATGCGCT GAACCCGACT TACACGATCA AGAATGGGCT ACGTGTAAGT GCGTCCGAAC AAGGCCTGCT CGATCAGACG CTCGCGAATC GTACGATCGA ATTCGAAACC GGTAGCGCGA CGCTCACGCC GCAAGGCCGC GCGATTCTCG ATCAGATGGC CGCCGCGATG GTAAAGATGA CGACGAAGAC CGTTGCGATC ATCGGCCACA CTGACAACTC GGGTAATCGC ACGTCGAATA TTGCGCTGAG CCAGGCGCGC GCGGATGCGG TGAAGGGTTA TCTGGTTGCC AAGGGCATTC CGCCGCAGCA GTTGTCGACC ACCGGCGTTG GCCCGGATCA ACCGATTGCA TCGAACGATA CGACGGATGG GCGCGCGCGG AATCGGCGAA TAGAGTTTCG TGCGGGGTCT TGA
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Protein sequence | MLNHTSTARM TVLLAGLLLG AFAHADNDGP ARVTPVDNSG VSIHTTVLPP AASASVGNAG PAVNTAGLAS GTTGAGTGAI TAAPPPANAT PGQVVVGGKV PDEATKAAVL ARLRDTYGAA NVVDQIEVAD VATPPNWSAN VQKLIGPQLK QISKGQLKID GTQIDVKGEV HNESQRQQLA SDMANALNPT YTIKNGLRVS ASEQGLLDQT LANRTIEFET GSATLTPQGR AILDQMAAAM VKMTTKTVAI IGHTDNSGNR TSNIALSQAR ADAVKGYLVA KGIPPQQLST TGVGPDQPIA SNDTTDGRAR NRRIEFRAGS
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