| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4919 |
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| Symbol | |
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| ID | 6278359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1044410 |
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| End bp | 1047085 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616005 |
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| Product | type VI secretion ATPase, ClpV1 family |
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| Protein accession | YP_001888653 |
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| Protein GI | 187919622 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.989717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00768481 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACGT CCCTCAATAC CCTGATCGCC AAACTGAATC CGACCTGCCG GCAGGCGGCT
TTGCTGGCGG CGAACAATTG TCTCGCGCGC GGTCACTACG AGGTCGACCT CGAGCATCTG
CTGCTCCCGC TGCTGGACGA ACCGGCCAGC GACGTCGCAC TGGTGCTGCG CGCGAGCAGG
ATCGACCCGC ACGCCTTGCG CGCGGATCTC GAGCGCGAGT TGCAGCGTTT GAAAACCGGC
AATACGCGTA CGCCGGTGTT TTCGAAGCAT CTGATCGAGT TGCTCGAACA GGCGTGGTTG
ATTGCATCGC TTGATTCGCA GATTGGGCGG ATTCGCTCAG GGCATCTGCT ACTGGCGCTT
TTGAGCGCAC CGGATCTCGC GCAATTCGCC GAGCGCATGT CGCCGCTGCT GCGCGACGTG
CGTGTGACCG ACCTGAAGCA CAAATTCGAT GAGCTGACTG CGGGTTCGCG CGAAGTCGAG
CACAGCAATG ACACGCAAAG CGCGGGAGAT AGCGCGAGTG ATCCGGTGGC GAGCGCTGTC
GCGCCGGGCG CGCCGTCTAA AACGCCCGCG CTCGATACCT ACACCAGCAA CCTCACGCAG
CGTGCGCGGG AAGGCAAGAT CGATCCGGTG ATCGGCCGCG AAGGCGAGAT TCGCCAGGCC
ATCGATATTC TGATGCGGCG CCGCCAGAAC AATCCGATCA TGACGGGCGA AGCGGGCGTC
GGTAAAACGG CCGTGGTCGA AGGTCTCGCG CTGCGCATTG CCGCCGACGA TGTGCCCGCG
CCGCTCAAAG GCGTCGCGCT GCACGTGCTC GACATGGGGT TGCTGCAAGC CGGCGCGAGC
GTGAAAGGCG AGTTCGAAAA CCGCCTGAAG AATGTGATCG ATGAGGTCAA GAAGAGTCCG
CATCCAATCA TTCTCTTTAT CGACGAAGCG CACACCATCA TCGGCGCCGG TGGTCAGGCC
GGGCAGAACG ATGCGGCCAA TCTGCTGAAG CCGGCCTTGG CGCGCGGCGA ATTGCGCACC
ATCGCGGCCA CCACGTGGAG CGAGTACAAG AAGTACTTCG AGAAAGACGC GGCGCTCGCG
CGGCGTTTCC AGGTCGTGAA GATCGAGGAG CCTAGCGAGG CGCTCGCCGC GGCTATGTTG
CGCGGCATGG CTTCGCTGAT GGAAAAGCAT TTCAATGTGC GCGTGCTGGA TGATGCGATC
ACAGAAGCCG TGCGTCTGTC GCATCGCTAC ATCAGCGGCC GGCAACTGCC GGATAAAGCG
ATCAGCGTGC TCGACACCGC TTGCGCGAAA GTCGCGCTCG CGCACAGTTC GACACCGGCG
ACCATCGACG ACACGAAAAA ACGCCTCGAA CGTATCGACG CTGAAATCGC CGCGCTGGAA
CGCGAAGCGG CGAGCGGCGC GCTGCACGAT GAACGCCTCG CTGAATTGCG CGGCCTGCGT
GAAGAGGACC TCAAAGACCT CGCCGCAGAC GAAGCGCGCT ACGACAAGGA ACGCGTATTG
GTGACGGAGA TAGTCGGCTT GCGCGCTGAC ATCGACGCGG CGCGCGTGAA CAGCGCGGGC
CCGGAGCAGG CGGATAAGGC ACAGCAGGCG CGCGAAAAGC TTGCCGCGCG CGTCGCCGAA
TTGCACGCCT TGCAAGGCGG CCAACCGATG GTGCCGCTGC AGGTCGACGC TCATGTGGTC
GCCGAAATCG TCGCCTCGTG GACCGGCATT CCGCTCGGCC GCATGGTCAA GGACGAAATC
CAGACCGTGC TGAACCTGCA GCCGTTGCTG GCCGCGCGTG TGATCGGTCA GGACCATGCG
CTCGAAGCGA TCGCGCAGCG CGTGCGCACC GCTAGTGCGA ATCTTGAAGA CCCGAACAAG
CCGCGCGGCG TGTTCATGTT CGTCGGACCG TCGGGCGTCG GCAAGACCGA AACCGCGCTT
GCGCTGGCCG ATGTGCTGTA CGGCGGCGAA CGCAAGATGG TCACGATCAA CATGAGCGAG
TATCAGGAAG CGCACAGCGT GTCCGGCCTG AAGGGTTCCC CGCCGGGCTA TGTCGGTTAC
GGCGAGGGCG GTGTGCTGAC CGAAGCGGTG CGCCGCAATC CGTATTCGGT GGTGCTGCTC
GACGAAGTCG AAAAGGCGCA CCCCGAAGTG CTCGAAATGT TCTTCCAGGT GTTCGACAAA
GGCACGATGG ACGACGCCGA AGGCCGCGAG ATCGATTTCC GCAACACGTT GATCATTCTG
ACTTCGAATG TCGGCTCGCA GGCGGTGATG CAGGCGTGCC TGAACAAGAG CGCGGAAGAA
CTGCCCGACG CCGATGAACT CGCGGAAACC TTGCGTCTGC AGTTATACAA AGCATTCAAA
CCGGCATTTC TCGGCCGCAT GAAAGTGGTG CCGTACTATC CGATTTCCGA CGACGTACTG
GCCGAGATCA TCGAATTGAA ACTCGACCGG ATTCGCCGCC GCATCGAGTC GAATCACAAG
GCAGTGTTCG AGTGGGACGA GTCGCTGGTC GATGCGGTGC TCGCGCGTTG CACCGAGGTG
GATTCCGGCG CACGCAATGT GGATCACATT CTGAACGGCA CGCTCCTGCC CGAAGTCGCG
CAGCAGGTGC TGGAACGTGT GGCGAACGGC GCCGCGATCG AGCGCATTGC CGTGCGCGCG
AGCGAGGCGG GTGAGTTCGA CTACACGGTG GTGTGA
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| Protein sequence | MSTSLNTLIA KLNPTCRQAA LLAANNCLAR GHYEVDLEHL LLPLLDEPAS DVALVLRASR
IDPHALRADL ERELQRLKTG NTRTPVFSKH LIELLEQAWL IASLDSQIGR IRSGHLLLAL
LSAPDLAQFA ERMSPLLRDV RVTDLKHKFD ELTAGSREVE HSNDTQSAGD SASDPVASAV
APGAPSKTPA LDTYTSNLTQ RAREGKIDPV IGREGEIRQA IDILMRRRQN NPIMTGEAGV
GKTAVVEGLA LRIAADDVPA PLKGVALHVL DMGLLQAGAS VKGEFENRLK NVIDEVKKSP
HPIILFIDEA HTIIGAGGQA GQNDAANLLK PALARGELRT IAATTWSEYK KYFEKDAALA
RRFQVVKIEE PSEALAAAML RGMASLMEKH FNVRVLDDAI TEAVRLSHRY ISGRQLPDKA
ISVLDTACAK VALAHSSTPA TIDDTKKRLE RIDAEIAALE REAASGALHD ERLAELRGLR
EEDLKDLAAD EARYDKERVL VTEIVGLRAD IDAARVNSAG PEQADKAQQA REKLAARVAE
LHALQGGQPM VPLQVDAHVV AEIVASWTGI PLGRMVKDEI QTVLNLQPLL AARVIGQDHA
LEAIAQRVRT ASANLEDPNK PRGVFMFVGP SGVGKTETAL ALADVLYGGE RKMVTINMSE
YQEAHSVSGL KGSPPGYVGY GEGGVLTEAV RRNPYSVVLL DEVEKAHPEV LEMFFQVFDK
GTMDDAEGRE IDFRNTLIIL TSNVGSQAVM QACLNKSAEE LPDADELAET LRLQLYKAFK
PAFLGRMKVV PYYPISDDVL AEIIELKLDR IRRRIESNHK AVFEWDESLV DAVLARCTEV
DSGARNVDHI LNGTLLPEVA QQVLERVANG AAIERIAVRA SEAGEFDYTV V
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