| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4918 |
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| Symbol | |
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| ID | 6277982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1043280 |
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| End bp | 1044374 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616004 |
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| Product | type VI secretion protein, VC_A0111 family |
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| Protein accession | YP_001888652 |
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| Protein GI | 187919621 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0191108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCG CGCAGCGGCG AATCGATCCT GGCGTAGTCG AGCAGCTTCT CGACGAGCCG
CATCGCTTCG AATTTTTTCA GGCGGTGCGG ATTCTCGAGA AGTGGTTCGC GCAGCAATCG
CCATCTCAAC CCGGACGTCC CGGCGAAATT GTCGCGCAGC GAATTGCTTT TCGCAATTCG
CTGTCGATGT CGTTCCCGCC GAGCGAGATT CACGGCGCGC AGTCTTATGA CGACGCAGGT
GCGGCGCTGA AGGAAAAGTC GCAACGCACG GCAGCGCTCG AAGACGGTTC GCTGGACAAG
GTGGATATCA CGCCGGCCTT TTTTGGTTTG CTCGGCGGGC AGGGCGCATT GCCGCTGCAC
TACACCGAGC AGATCATCGC GCGTGAACAG ATCAAGCGCG ATCGTGCCGC GCGCGAGTTC
TTCGACGTGT TTTCGAATCG CGCGACGGCG CTGTTCTACG CGGCGTGGAA GAAGTACCGT
CTGCCGTTTC ACTACGAACT GGATCGCGAC GAACGTTACC TGCCGCTATT GCTCGCGCTC
GCCGGCGTCG CCGACGACGA CACGCGCAAC AGCCTGCAAA GCGGCGAGGG CGCGCTATTC
GACGAGGCGA TTGCCGGCTA CGCATTGGCC GCGCGGCATC GGCCGGTATC GGCGGCGTAT
TTGCAACGCA CGCTCTCGGA GTACTTCAAG GTGCGGGTGC GCGTCGAGCA GTTCGTCGGC
AAATGGTACG ACGTGCCGCG CGATCAATTG ACCTTGCTCG GCAGCGTCAA CGCGACGCTC
GGCGCGACTG CGCTGGCGGG CGAGCGCGTC TGGCAGCGCG ACATGCGTGC GCGCCTCGTG
ATCGGACCGC TCGACAAGGC CGATTACGAA GCGTTTTTGC CCGGCGCCGA TCGTGCGGTG
GCGCTCGAAC GCATGCTCAC GCTGCTGGCC GGCGTTACGC TCGAATACGA GGTGTCGCTG
GTGCTGCGCC GCGAAGCCGT CGGACCGAGC TTATTGAGCA AGGGCGCGCG CCTGGGTTGG
GACGCATTCC TGTGCACTAA AGACGCCGAC CGTGACCGCG CGGATGCCCG CTACGAATTG
CACGTGATTC ACTGA
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| Protein sequence | MQTAQRRIDP GVVEQLLDEP HRFEFFQAVR ILEKWFAQQS PSQPGRPGEI VAQRIAFRNS
LSMSFPPSEI HGAQSYDDAG AALKEKSQRT AALEDGSLDK VDITPAFFGL LGGQGALPLH
YTEQIIAREQ IKRDRAAREF FDVFSNRATA LFYAAWKKYR LPFHYELDRD ERYLPLLLAL
AGVADDDTRN SLQSGEGALF DEAIAGYALA ARHRPVSAAY LQRTLSEYFK VRVRVEQFVG
KWYDVPRDQL TLLGSVNATL GATALAGERV WQRDMRARLV IGPLDKADYE AFLPGADRAV
ALERMLTLLA GVTLEYEVSL VLRREAVGPS LLSKGARLGW DAFLCTKDAD RDRADARYEL
HVIH
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