| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4906 |
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| Symbol | |
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| ID | 6278847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1030272 |
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| End bp | 1031378 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615992 |
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| Product | TrkA-N domain protein |
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| Protein accession | YP_001888640 |
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| Protein GI | 187919609 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1226] Kef-type K+ transport systems, predicted NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0415092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGATT CACCCAAGCC GGAGCCACGT CTGCCGCGCT TCCGTCTGCC GCGCCGCGCC
CGCACGCCCT GGCAGGCGCC GCGCGCCCGC ACGCTGTTCA CGCGGCCGGC GGCGTCGCCG
CAGCGCATGC TGCTGCATCG CGTCTATCTG GTGGTGGGCC TGTGCGTGCT CGCCTTCGCC
GTGCTCTATT TCGATCGGGA CGGGTTGCGC GATGCCAACC GCAAAGTCCT GGGCATCGTC
GATCTGATGT ACTTCACCAT GGTGACGGTA GCCACCGTCG GTTACGGCGA CATCGTGCCG
GTGACCGCTC GCGCGCGCCT CATCGACGCT TTTTTCATCG TGCCGATCCG CATCGTCATC
TGGTTCGTGT TTCTCGGCAC CGCTTATCAG TTCGTCATTC AACGCGTCAT CGAGGAATTC
CGCATGAAAC GCCTGCAAAA GCAGTTGCGC GATCACGTCG TGATTTGCGG CTATGGATTG
AGCGGTTCGG TCGCGGTGCG CGAGTTGCTG GAAAGCGGCT TCGCCGCGGA ATCGATTGTC
GTCATAGATC CGCAGCAGGC GGCGCTCGAA GCGGCCACGG CGCTGGGTGT AGCAGGCCTG
CTCGGCGATC CGTCGCGCGA GGACCTGTTG CAGCAGGCGC AGGTGCAGAT CGCCCGCGCG
GTCATCATCG CCGTCACCGA CGACGCCACC GCCATTCTGC TCACGCTGAC TGTGCGCAGC
GTCGCGCCGC AAACCAAGAT CGTCGTGCGG ATTCAGGAGC AGACCTATCA GCGCCAGTTG
CGCCAGGCCG GGGCGAGCGT GATCGTCTCG TCGACCAAGA TCGGCGGCTT GCTGCTTGCC
GACGCGGTCG ACAGCGAATA CATCGTGCCT TTCGTGAACG ATCTGTTGTC GGCGCGCGGC
CGCGTCAACC TGGTCGAACG CCGGGCGAGC GCGCAGGAAG TCGGCCGCTG GAGCAATGCG
CTGCCGGGCG CGGTGGTGGT GGGTCTCGTG CGCGCGGGGC GCGTGCTGTC GTTTTACGAA
GACGAGCCGT GTCCGATCGA GGCGGGCGAT CTGCTGATGC TGATCCAGTC GTCACGCCAG
CCGAATGAAA CGCCCGCCGT CTGCTAG
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| Protein sequence | MPDSPKPEPR LPRFRLPRRA RTPWQAPRAR TLFTRPAASP QRMLLHRVYL VVGLCVLAFA
VLYFDRDGLR DANRKVLGIV DLMYFTMVTV ATVGYGDIVP VTARARLIDA FFIVPIRIVI
WFVFLGTAYQ FVIQRVIEEF RMKRLQKQLR DHVVICGYGL SGSVAVRELL ESGFAAESIV
VIDPQQAALE AATALGVAGL LGDPSREDLL QQAQVQIARA VIIAVTDDAT AILLTLTVRS
VAPQTKIVVR IQEQTYQRQL RQAGASVIVS STKIGGLLLA DAVDSEYIVP FVNDLLSARG
RVNLVERRAS AQEVGRWSNA LPGAVVVGLV RAGRVLSFYE DEPCPIEAGD LLMLIQSSRQ
PNETPAVC
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