| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4896 |
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| Symbol | |
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| ID | 6279704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1019200 |
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| End bp | 1020894 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615982 |
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| Product | NERD domain protein |
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| Protein accession | YP_001888630 |
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| Protein GI | 187919599 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0805838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCA TAGTTCCCGA CGACTGGAAG AGCCTCGCCG CGACCGGCGC GGCGGCTCGC
GAACGCGAAA CGCTGGCGTT GCTGGAAGAG ACGCTGCCCG ATGGCTACAC CGTTTATCAC
GGCGTGCACT GGACGCGCCT GAACCAGAAC TTCTCGGTGT TCGGCGAAGC CGACTTCGTG
ATCGTCAGCC CGGCCGGGCG CGTGATGATC GTCGAACAGA AAACCGGCTT TCTGCGCGAA
ACGCCGAAAG GGCTCGTCAA GGTCTATCTG CAAACCGAGC GCAACGTGGC GATCGCGCTC
GCCCACACCA TCGAAAGTTT GCATCGGCGC TTTACTGCCG CGTTCGGCGC GGGCACGTAT
TTCGTCGAGG AATTGCTGTA TTGCCCGGAT CACGTCGTCA AGGACGCGGC GATCGCCGGC
GTGAATCCCG CGCGAATCGT CGATGCAACG CGTAAAGACC GGCTCGCGGC GATCGTCCGC
GAAGCCTTGC CCGCAGATGA ACCACGTCTA GCCTGCGCGC CGAAAATTCA CCACTTCCTC
GCCGACGAAC TGGCGCTCAC CCCCGACGCC AGCGCGTTGG TCGGCCAGGC GGGCACGCTC
GTCACGCGTC TCGCGGGCGG TCTCGCGACC TGGGCGCGGC GGCTCGAATT CGCGCCGTTC
CGGCTGCGCG TGATCGGCAC GGCCGGCTCG GGCAAAACGC AACTCGCGGT GCAAGTGATG
AAGGACGCGG TGGCGCGCGG CCAGACGCCG CTATACGTGT GCTTCAACCG GCCGCTGGCG
GACCACATCG CGCGAGTCGC GCCGCCCGAA GCGAAGGTGG CGAACTATCA CCAGCTCTGC
GACTGGATTG CGCGCGACGC GGGCCGCGCG CCGGATTTTC AGGCGGGCGA TGTCTTCGAT
CAGCTCGAAA CCACGTTCGC CGACACACCG ATCGATCCGC GCTGGCAGTT CGACGTGCTG
ATCGTCGACG AAGGGCAGGA TTTCCAGCAG CCGTGGGTGG CGGCACTCGA GCGTCTGTTG
CGCCCCAACG CCGCGTGGTG GTGGCTCGAA GACCCGCTGC AAAATCTGTA TATGCGTGAA
CCCGTCGCGC TGCCGGGCTG GACCACGCTG AAGGAAACCA CCAACTATCG CAGTCCGCGC
GACATTCTCG ATTATGTGCG CGACGTGGTC GGCGCTTCGG TTCCGGTCGC CGCCGCGCTC
GCCTCGGGCA GTCCGTTCGA CGGCTCCGAC ATTTCGCTCT CGGTCTACGA CGAAGCGAAC
GCCGCCGAAG GCAGCATCGA GGCCACCAAG CGCGCGATCA CGCAGGCGCT CTCGCTCGGC
TTTCGCAAGC AGGACATCGT GGTGCTGTCG TTTCGCGGCC GCGAAGGCTC GGCGATGAGC
GCTTTGGATC ACCTCGGGCC GCATCGGTTG CGCAGTTTCA CCGGCAAGTA CGATCTGTTC
GGCAACCCGG AGTACCGCGA GGGCGACGTG CTGTTCGAGT CGATCTACCG CTTCAAGGGG
CAGGCGGCGC CGTGCGTGAT TTTTACGGAG ATCGACTTCG CGACTTTCGA CGAACGCATC
GCGCGCAAGC TATTCGTCGG CGCCACGCGC GCGACCATGA AGCTGATCGT CGTCGCGTCG
CAGCGCGCCG CTCGGCATCT GCATTTGCGC GACGGCAAGG AGAGCCGCGA AGTGAAGGAA
GCGAAAGAGG TCTAA
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| Protein sequence | MARIVPDDWK SLAATGAAAR ERETLALLEE TLPDGYTVYH GVHWTRLNQN FSVFGEADFV
IVSPAGRVMI VEQKTGFLRE TPKGLVKVYL QTERNVAIAL AHTIESLHRR FTAAFGAGTY
FVEELLYCPD HVVKDAAIAG VNPARIVDAT RKDRLAAIVR EALPADEPRL ACAPKIHHFL
ADELALTPDA SALVGQAGTL VTRLAGGLAT WARRLEFAPF RLRVIGTAGS GKTQLAVQVM
KDAVARGQTP LYVCFNRPLA DHIARVAPPE AKVANYHQLC DWIARDAGRA PDFQAGDVFD
QLETTFADTP IDPRWQFDVL IVDEGQDFQQ PWVAALERLL RPNAAWWWLE DPLQNLYMRE
PVALPGWTTL KETTNYRSPR DILDYVRDVV GASVPVAAAL ASGSPFDGSD ISLSVYDEAN
AAEGSIEATK RAITQALSLG FRKQDIVVLS FRGREGSAMS ALDHLGPHRL RSFTGKYDLF
GNPEYREGDV LFESIYRFKG QAAPCVIFTE IDFATFDERI ARKLFVGATR ATMKLIVVAS
QRAARHLHLR DGKESREVKE AKEV
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