| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4864 |
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| Symbol | |
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| ID | 6278582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 987186 |
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| End bp | 988103 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615951 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_001888599 |
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| Protein GI | 187919568 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.556224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0460344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC CGCAGGAACT GAAGCAGATC GTTTCCGAAG GCCTCCTGTC CTTCCCGGTT
ACCGACTTCG ACGAACAAGG CGATTTCCGC GCCGATACGT ATGCTGAGCG CCTCGAATGG
CTTGCTCCTT ACGGCGCGTC GGCGCTGTTC GTCGCCGGCG GCACGGGCGA ATTCTTCTCG
CTCACGCACA ACGACTATTC GAACGTCGTG AAAACGGCTA CCGAAGTCTG CAAAGGCAAG
GTGCCGATTC TCGCCGGCGC GGGCGGCCCG ACGCGCGTAG CGATTGCCTA CGCACAGGAA
GCCGAGCGTC ATGGCGCGAA CGGCATTCTG TTGATGCCGC ATTACCTGAC GGAAGCGTGC
CAGGAAGGCA TCGCCGCACA CGCTGAAGAA GTCTGCAAGT CCGTGCCGAA CATGGGCGTG
ATCATCTACA ACCGCGCGAA CTCCAAGCTT AACGCCGATA TGCTCGAAGG CCTGGCCGAG
CGCTGCCCGA ACCTGATCGG CTTCAAGGAC GGCGTGGGCG AGATCGAGAA CATGGTGTCG
ATCCGCCGCC GCCTCGGCGA CCGTTTCTCG TATCTCGGCG GCCTGCCGAC CGCTGAAGTT
TATGCAGCGG CGTACAAGGC GCTGGGCGTG CCGGTGTATT CGTCGGCGGT GTTCAACTTC
ATTCCGAAGA CCGCGATGGA CTTCTACCGG GCGATTGCCG CGGACGACCA CGCCACGGTC
GGCAAGCTGA TCGACGAATT CTTCCTGCCG TATCTGGCGA TCCGCAACCG CCGCGCAGGC
TACGCGGTCA GCATCGTCAA GGCGGGCGCG AAGCTGGTCG GCCACAGCGC CGGCCCGGTC
CGCGCACCGC TGACGGATCT GACGGAAGAA GAAATGGGCA AGCTGGACGC GCTCATCAAG
ACGCTCGGCC CGCAGTAA
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| Protein sequence | MTTPQELKQI VSEGLLSFPV TDFDEQGDFR ADTYAERLEW LAPYGASALF VAGGTGEFFS
LTHNDYSNVV KTATEVCKGK VPILAGAGGP TRVAIAYAQE AERHGANGIL LMPHYLTEAC
QEGIAAHAEE VCKSVPNMGV IIYNRANSKL NADMLEGLAE RCPNLIGFKD GVGEIENMVS
IRRRLGDRFS YLGGLPTAEV YAAAYKALGV PVYSSAVFNF IPKTAMDFYR AIAADDHATV
GKLIDEFFLP YLAIRNRRAG YAVSIVKAGA KLVGHSAGPV RAPLTDLTEE EMGKLDALIK
TLGPQ
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