| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4831 |
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| Symbol | |
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| ID | 6278796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 946724 |
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| End bp | 948247 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615918 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_001888566 |
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| Protein GI | 187919535 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0156749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.100608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG CCCATTTCAA CGGACCTGGC GCACAAGCGC GTCCGTTTCG CGATTCCGCG
CCGCGCGCCG CTCTCACGCG CCACTCGCGT TTGCCCTCGG TGCGGCGTGC CGCCCTCTGC
ACGGCGTTCG CCTGGGCGTC GCTGACAGCC GGCGTCGCCA TGGCCGAAGC CAATCCCGAC
GCCGCGCCCG AAGCGCCCGA GGCCGACCTG AAGATTCAGG CGACCCAGGC GAACCAGTGG
ACCGGTTTCT GGAATCGCCA GCAGATGCTT GGCGACATCG GCGGCCTGCG CCCCTGGCTC
GGCAAATACG GCGTGACCTT CACGCTCACC GAGACCAGCG AAGTGCTTGC CAATCTGCGC
GGCGGTCTCG CGAAAGGCGC CGACTACGAT GGCCTGACGA CCGCCACCGT GCAACTGGAC
ACGCAAAAAG CGTTCGGCCT GCCGGGCGGC CTGTTCAACG TCAGCGCGTT GCAGATACAT
GGCGCGAATC TCAGCGCCAA CAAGCTCGGC ACGCTGAATA CGGCGAGCGG CATCGAAGCG
GACGACACGA CCCGTCTGTG GGAATTGTGG TACCAGCAAT CGTTCCTGAA CAAACGCATC
GACGTGAAGA TCGGTCAGCA AAGCATCGAC CAGGAATTCA TCACGAGCCA ATACTCGGCG
CTGTTCGTCA ACACGATGTT CGGCTGGCCC GCGCTGCCTT CGTACGACAT GCCCTCAGGC
GGTCCGGCGT ATCCGCTGTC CGACCTCGGC GTGCGCGTGC GCGGCCAGAT CACGCCTTCG
TTGACGGCTC TCGCCGGCGT GTACGACGGC GACCCGCTCG GCAACAACCC GAACAACAAG
AGCGGCACCA ACTTCAATCT GCACAACGGC ACGCTGTTCA TCGGCGAGTT GCAGTATGCG
ATCAACCAGC CGGCCGACGG CGAGATGGTC GGCGCGGGCG GCGGCGGTTT GCCCGGCACC
TACAAGCTCG GCGTCTGGTA CAACAACGGC AGCTTCGCGG ATCAACGCTA CGACAACACC
GGCTTGTCGC TCGCGAATCC GGCCACGAGC GGCGTCGCCC AGAATCATCG CGGCGACTAC
AGCATCTACG CGGTGGCCGA CCAGATGATC TGGCGTCCCG ATCCTGACGA GCCGCGCAGC
ATCGGCGTGT TCGCGCGCGT GATGGGCGCG CCCGGCGACC GCAACCTGGT CAGCCTCGCG
GCGAACGTCG GCGTCGTGAT GAAAGCGCCG TTCCAAGGCC GCGACAACGA CAGCGTGGGC
CTTGCGCTTA CCTACATCAA GGTCGGCAAT CATGTGAACG GACTCGATGC GGATACCCGC
GCGTTCACCA ACGGACCGTA CGGCGTGCGA ACCAGCGAAA CCGCGCTCGA AGCGACCTAT
CAGTACCAGG TCAATCCGTG GTGGCAAGTG CAAGCCGACG CGCAATACAC GTTCAACGCC
GGTGCCGGCC AGAATCCGAA CGATCCGACG CAGCCGCTGC GCAACACGTT CGTCATCGGC
GTGCGGACCA ACATCAACTT CTGA
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| Protein sequence | MKFAHFNGPG AQARPFRDSA PRAALTRHSR LPSVRRAALC TAFAWASLTA GVAMAEANPD
AAPEAPEADL KIQATQANQW TGFWNRQQML GDIGGLRPWL GKYGVTFTLT ETSEVLANLR
GGLAKGADYD GLTTATVQLD TQKAFGLPGG LFNVSALQIH GANLSANKLG TLNTASGIEA
DDTTRLWELW YQQSFLNKRI DVKIGQQSID QEFITSQYSA LFVNTMFGWP ALPSYDMPSG
GPAYPLSDLG VRVRGQITPS LTALAGVYDG DPLGNNPNNK SGTNFNLHNG TLFIGELQYA
INQPADGEMV GAGGGGLPGT YKLGVWYNNG SFADQRYDNT GLSLANPATS GVAQNHRGDY
SIYAVADQMI WRPDPDEPRS IGVFARVMGA PGDRNLVSLA ANVGVVMKAP FQGRDNDSVG
LALTYIKVGN HVNGLDADTR AFTNGPYGVR TSETALEATY QYQVNPWWQV QADAQYTFNA
GAGQNPNDPT QPLRNTFVIG VRTNINF
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