Gene Bphyt_4819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4819 
Symbol 
ID6278388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp933095 
End bp933409 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content66% 
IMG OID642615906 
Productmalonate decarboxylase subunit delta 
Protein accessionYP_001888554 
Protein GI187919523 
COG category 
COG ID 
TIGRFAM ID[TIGR03130] malonate decarboxylase acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0030528 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0215828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATC TGACTTTCGA CTATCCGGCC AAACGCGCCG TCAAGACCCG CGCGCATGTC 
GGCGTGGTGG GCTCGGGCGA TCTGGAAGTG CTGCTCTCGC CCGCCGATCC GGCTAGCGCG
CTGACGGCGC ACGTGGTCGT GCGCACCAGC GTCGACGGTT ACAGCCACAT CTGGAAGAGC
GTGTTCGACC GCTTTTTCAC GCGCTACGAC GGCGCCGCGC AAATCGAGAT CAACGACTTC
GGCGCGACGC CCGGCGTGGT GGCGTTGCGC CTCGCGGAAG CCGTCGAAGC CGCCGAACAG
GGAGACGACG CATGA
 
Protein sequence
MEHLTFDYPA KRAVKTRAHV GVVGSGDLEV LLSPADPASA LTAHVVVRTS VDGYSHIWKS 
VFDRFFTRYD GAAQIEINDF GATPGVVALR LAEAVEAAEQ GDDA