Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4809 |
Symbol | |
ID | 6278393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 922665 |
End bp | 924314 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615896 |
Product | ABC transporter related |
Protein accession | YP_001888544 |
Protein GI | 187919513 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0173038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00297179 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCATC CCGCTTCCGA ACCGAATCCG CCAGTTGGCG GCGCCGGCAA CGTCCAAGCG ACCACCGGCA TGACCGGCGC CGCCGCAACC CAAGCCGGCG GCACCACGAA CGCACTCGAA CCCATTCTCG CTACCGCGGG CGTCAGCAAG ACATTCCCCG GCGTGAAGGC GCTGCAGCGC GTCGATTTCC GCCTGTTTCC CGGCGAGATT CACACGCTGA TGGGGCAGAA CGGCGCAGGC AAATCTACTT TAATCAATGT GCTTACCGGC GTGCTGGCAC CGGACGAGGG CACGATCCGC CTCGGTGGCG AGCTGGTGGC GTTCGCCTCG CCGCAGGAAG CCGAAGGCGC CGGCGTGCGG ACGCTATACC AAGAAGTAAA CCTGTGCCCG AACCTCTCGG TGGCCGAGAA CATTTTCGCG GGCCGGCAAC CGAGGCGCTT CGGCGCGATC GACTGGCCCG ACATCAAGCG GCGCGCCCAG GCCGCGCTGG CGCGCCTCGA CGTGACACTC GACGTCACCC GTTCGCTCGA CGCCTATCCG ATCGCCGTGC AGCAGATGGT GGCCATCGCG CGGGCGCTCT CGGTGGACGC ACGCGTCTTG ATCCTCGACG AACCGACCTC GAGTCTCGAC GACGGCGAAG TAAGCCAGCT TTTCAAAATA CTTCGGCATC TTAAGCAATC GGGCATTGCA ATTCTTTTCG TCACGCACTT CATCGAGCAG ACGTATGCCA TCTCCGATCG TATAACGGTA ATGCGCAATG GCGAGCGCGA AGGCGAATAT CTCGCGCGCG ATCTCCCGGC CGATCAACTC GTGTCGAAGA TGGTCGGCCA CGAGCGCATG AGCGCGCGTT TGCGCGAAGC CGCGCACGAA GGGCATCAAG GGCACGAAGC TCACGCAGGG CCGCAAGCCG CGCAGGCTGT CCAGCCGTTC GTCGAGTTGC GTGGCGTCGG ACGGCGCGGC ACGATGCAGC CGATCGACCT CGACGTGCAG CCGGGCCAAA TCCTCGGTCT GGCCGGTTTG CTCGGTTCGG GCCGCACGGA AACCGCGCGG CTGTTGTTCG GCGCGGACCG TGCCGACAGC GGCACGATTC TGGTGGAAGG CCGGCCTGTG CGGCTGCGTT CGCCGCGCGA CGCGGTGCGC CACGGCATCG GCTATTGCGC GGAAGACCGC AAGAAAGAGG GCATCGTCGC CGAACTGTCG ATCCGCGACA ACATCCTGCT GGCTTTGCAG GCGCGGCGCG GATGGTGGCG CAAGATCAGC CGGCAGCGCG CGCGCGAGCT GGCCGATCTG TGGATCGAGC GGCTCGGCAT CAAGGCCGCC GATGCGGAAC AGCCAATCGG CCTGCTGTCC GGCGGCAATC AGCAGAAAGC GCTGCTGGCG CGCTGGCTCG CGACCGATCC CAAACTGCTG ATTCTCGACG AACCGACGCG CGGCATCGAT GTCGCGGCCA AGTTCGACAT CATGGACCGG CTGCTGGCGT TATGCGCGAG CGGGTTGAGC ATCCTGTTCA TTTCGTCGGA GATTAGCGAG GTGCTGCGCG TGAGTCATCG CGTAGCGGTG TTGCGCGACC GTCGCAAGAT TGCCGAAGTG GCCGGCAAGG CGTCGAACGA AGACAATATC TATCGACTCA TCGCGGGGAG CGGCGAATGA
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Protein sequence | MTHPASEPNP PVGGAGNVQA TTGMTGAAAT QAGGTTNALE PILATAGVSK TFPGVKALQR VDFRLFPGEI HTLMGQNGAG KSTLINVLTG VLAPDEGTIR LGGELVAFAS PQEAEGAGVR TLYQEVNLCP NLSVAENIFA GRQPRRFGAI DWPDIKRRAQ AALARLDVTL DVTRSLDAYP IAVQQMVAIA RALSVDARVL ILDEPTSSLD DGEVSQLFKI LRHLKQSGIA ILFVTHFIEQ TYAISDRITV MRNGEREGEY LARDLPADQL VSKMVGHERM SARLREAAHE GHQGHEAHAG PQAAQAVQPF VELRGVGRRG TMQPIDLDVQ PGQILGLAGL LGSGRTETAR LLFGADRADS GTILVEGRPV RLRSPRDAVR HGIGYCAEDR KKEGIVAELS IRDNILLALQ ARRGWWRKIS RQRARELADL WIERLGIKAA DAEQPIGLLS GGNQQKALLA RWLATDPKLL ILDEPTRGID VAAKFDIMDR LLALCASGLS ILFISSEISE VLRVSHRVAV LRDRRKIAEV AGKASNEDNI YRLIAGSGE
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