Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4777 |
Symbol | |
ID | 6280268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 882564 |
End bp | 883073 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642615859 |
Product | hypothetical protein |
Protein accession | YP_001888512 |
Protein GI | 187919481 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00674885 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00133084 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAATTT CGATGTATCA AGCATCACTG CCCGTGTTGA TCCGCGGCCT GACGAACCTG CAGGTTATTC TGGGCAAAGC GGAGGCGCAT GCCGCCGCGA AACAGATCGA GCCCACCGTG TTCACCACCG GCCGGCTCGC ACCGGACATG CTGCCGCTGA CGCGTCAGGT CTATATCGCG AGCGACACCG CGAAGGGCTG CGCCGCGCGT CTTGCCGGCG TCGAAGCGCC GAAGTACGAA GACGTCGAGC AGACTTTTGA AGAACTGATT GCCCGCCTTC AAAAGACGAT CGATTATCTG AAGGAATTCA ATGCGGAACA GATCGACGGC TCGGAAGAAC GCGCGATCAC GCTGAAGCTG CGCTCGGGCC CGGTCGAGTT CACCGGGCAG TCGTATCTGC TCGGTTTCGT GCTGCCGAAC TTCTATTTTC ACGTCACGAC GGCGTATGAC ATTCTGCGTC ACAACGGCGT CGATCTCGGC AAGCTCGACT ATCTCGGCGG CATCAAGTAA
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Protein sequence | MPISMYQASL PVLIRGLTNL QVILGKAEAH AAAKQIEPTV FTTGRLAPDM LPLTRQVYIA SDTAKGCAAR LAGVEAPKYE DVEQTFEELI ARLQKTIDYL KEFNAEQIDG SEERAITLKL RSGPVEFTGQ SYLLGFVLPN FYFHVTTAYD ILRHNGVDLG KLDYLGGIK
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