Gene Bphyt_4777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4777 
Symbol 
ID6280268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp882564 
End bp883073 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content59% 
IMG OID642615859 
Producthypothetical protein 
Protein accessionYP_001888512 
Protein GI187919481 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00674885 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00133084 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAATTT CGATGTATCA AGCATCACTG CCCGTGTTGA TCCGCGGCCT GACGAACCTG 
CAGGTTATTC TGGGCAAAGC GGAGGCGCAT GCCGCCGCGA AACAGATCGA GCCCACCGTG
TTCACCACCG GCCGGCTCGC ACCGGACATG CTGCCGCTGA CGCGTCAGGT CTATATCGCG
AGCGACACCG CGAAGGGCTG CGCCGCGCGT CTTGCCGGCG TCGAAGCGCC GAAGTACGAA
GACGTCGAGC AGACTTTTGA AGAACTGATT GCCCGCCTTC AAAAGACGAT CGATTATCTG
AAGGAATTCA ATGCGGAACA GATCGACGGC TCGGAAGAAC GCGCGATCAC GCTGAAGCTG
CGCTCGGGCC CGGTCGAGTT CACCGGGCAG TCGTATCTGC TCGGTTTCGT GCTGCCGAAC
TTCTATTTTC ACGTCACGAC GGCGTATGAC ATTCTGCGTC ACAACGGCGT CGATCTCGGC
AAGCTCGACT ATCTCGGCGG CATCAAGTAA
 
Protein sequence
MPISMYQASL PVLIRGLTNL QVILGKAEAH AAAKQIEPTV FTTGRLAPDM LPLTRQVYIA 
SDTAKGCAAR LAGVEAPKYE DVEQTFEELI ARLQKTIDYL KEFNAEQIDG SEERAITLKL
RSGPVEFTGQ SYLLGFVLPN FYFHVTTAYD ILRHNGVDLG KLDYLGGIK